query_name string | source_chrom string | source_start int64 | source_end int64 | region_label string | species string | alignment_name string | assembly string | taxonomy_id int64 | family string | clade string | phylogenetic_rank int64 | alignment_source string | t_chrom string | t_start int64 | t_end int64 | t_strand string | t_src_size int64 | pre_resize_t_start int64 | pre_resize_t_end int64 | fragment_count int64 | aligned_bases int64 | sequence string | augmentation string |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
win_chr6_001138174 | chr6 | 145,686,144 | 145,686,399 | cds | Nesogale talazaci | Microgale_talazaci | GCA_004026705.1 | 2,583,312 | Tenrecidae | mammals | 1 | zoonomia_cactus | MicTal_scaffold_57459 | 14,154 | 14,409 | - | 26,959 | 14,155 | 14,408 | 2 | 253 | TTTATTTATTCCCATCTTTCTATTAAATTTGCCTCAGCTCCTTGGAGGCTATTTAGACAAAACAAGGATTTAATTGCTGTTTGTCATTTCTTCTTGTTTTAGGCAGTGGGCCACATCATGACCGTTGCTGTACTTATAATGAAAACAACTTGGTGGATGGTGTTTATTGTCTTCCGATTGGACACTGGATCGAGGCCACGGGACACACCAATGAAATGAAGCACACCACCGACTTCTATTTTAATATTGCCGGTC | - |
win_chr19_000145845 | chr19 | 18,668,032 | 18,668,287 | cds | Galeopterus variegatus | Galeopterus_variegatus | GCA_004027255.1 | 482,537 | Cynocephalidae | mammals | 1 | zoonomia_cactus | GalVar_scaffold_5529 | 112,677 | 112,932 | - | 125,306 | 112,677 | 112,932 | 1 | 255 | ATCTCGTGCTGCCGGAAGGGCAGCACCTGGTAGTTGAAGGCCTCCAGCAGATACTGGCGGCAGAGCACGTCCTCCACCATGATGTCCAGCGTCTGTACGCTGTCCACCAGCTCCGATGACTGCATGAGCGGGAAGCGGATGTGGCAGAGCACGTGGCTGGCACGGGGCCGCCGCGCCGGGTCATGCTGCAGCCAGCGGACTGCGGCGCGGAACAGGTCGATCTCGGTGCAGCTCTGCAGCCGGTTGCTCTGCAGG | - |
win_chr9_001019491 | chr9 | 130,494,720 | 130,494,975 | ccre_non_promoter | Platanista gangetica | Platanista_gangetica | GCA_054084255.1 | 118,798 | Platanistidae | mammals | 1 | zoonomia_cactus | PlaMin_flattened_line_142741 | 9,072 | 9,327 | - | 10,693 | 9,052 | 9,346 | 14 | 178 | CTCCACAGTGAACAAGGCAGATGCAGGACTGCCCTCCCAGGTTCATGTCTGCCATGACGGGGTGAGGCGCAGGGTGCCTTTCCTGGACCCCAGTCCTCCCCACGTCCTGGCCCGAGGCAGGCACACGGTGGGCCTCCCCGGCACACTCGCTTCTTCCTCCCTGCAGGTTTCTGGCACAGCCCCGAGTGTGAATTTGTCCGCCACTGCATTGCCAAGTCCCAGGAGCACGTGGAAGGGAAAGTGCGGGTGTCCGTC | + |
win_chr1_000215242 | chr1 | 27,550,848 | 27,551,103 | cds | Miniopterus schreibersii | Miniopterus_schreibersii | GCA_004026525.1 | 9,433 | Miniopteridae | mammals | 1 | zoonomia_cactus | MinSch_scaffold_15560 | 68,690 | 68,945 | + | 74,634 | 68,690 | 68,945 | 1 | 255 | CCAGCCCTGTGGGCATAGGCAGGGGCAGCAGGCGGCCCTCAGGTCCAGCGTCTGCCTTACGTCCCCGACCGGCTTTCCGCCGGCGACACAGAATCTTTGGCCTATCAGTGCGCCGCAAGGCGTACTTGGGGAGACCCTCAGGCCCAGGGGGACCATGGGGTGAGCACAAGTCTAGGCGCAAGGGCTCGGCCAGTGGGCAGGGCCCTAGAGGCTGCTGGGGCTCCAGACGACGGCCGGGGACGTCAAGCAACTTGG | + |
win_chr3_001320482 | chr3 | 169,021,568 | 169,021,823 | ccre_non_promoter | Cavia porcellus | Cavia_porcellus | GCF_000151735.1 | 10,141 | Caviidae | mammals | 1 | zoonomia_cactus | DS562955.1 | 1,580,793 | 1,581,048 | + | 5,102,418 | 1,580,804 | 1,581,037 | 9 | 222 | TGTTTATGTGAAAACTCAAGCTGCTGCCACTACTAGAAACTTCATGCTGGTGGCAACTCATCAGAACTATGAAATCTAAGGCCTAAAAGCTGGTCTTGGACAGATTAAACAAAACACTCAGCAAATACACTGCACTGTTGTTGGCTGAAGCTCATTTTCAGAAATACATTGCTCAGCACTAAAATGGACAGTGTAATCAGTTCCCCTGCAGAAATGGCAAGATTTTTATAGAGGCAAGAAAATGTACAGAGATGA | + |
win_chr7_001035788 | chr7 | 132,580,736 | 132,580,991 | ccre_non_promoter | Orycteropus afer | Orycteropus_afer | GCA_004365145.1 | 9,818 | Orycteropodidae | mammals | 1 | zoonomia_cactus | OryAfe_flattened_line_140553 | 1,466 | 1,721 | + | 17,799 | 1,467 | 1,719 | 15 | 233 | TAAAAGCCAGATTCACTCGTTAAATAAGAGCCTGGTGGTGCTATAGGGAGGTTTTTTTCCCTCAAGAGCTGACAGTATGGCTAAGCCCTGTACCAGCACGCTGGATAAAAACCGCAGGCTGTCAGCTGCTAAAAACCTAAATTGTGGCGCCACCTGCAGGCGAGCAGAAATATCAACATTTCCCCAATTCTGGCATAGCCTGGGAGGGGAGGCGCCTTCCGCATTGACGCTGCGCGGCTGCGGGAGACCAGAGGC | + |
win_chrX_001015851 | chrX | 130,028,800 | 130,029,055 | ccre_non_promoter | Vicugna pacos | Vicugna_pacos | GCA_000767525.1 | 30,538 | Camelidae | mammals | 1 | zoonomia_cactus | KN271048.1 | 2,361,382 | 2,361,637 | - | 11,886,753 | 2,361,340 | 2,361,679 | 16 | 233 | AACTTTAGTTCCCATTCTTCAAATCCACACCCCAAGCCTTCCataactaatttaaaatactttaataaacaTGGGTTAATTTGATCCTCCCcacgcacacactcactcacttacttactGAGAAGACTGTTGACCAAGAAGCCTGTGGAAAATCTGCTGCCCTAGCCCACTACCCCTCTACATACCTTCCTCCCTCACAACTCCCTCCCCCACAGCTCCCCTGGCCAGCACCATACCTTTGCCTCTTCTGAGACC | - |
win_chr10_000733395 | chr10 | 93,874,432 | 93,874,687 | ccre_non_promoter | Microcebus murinus | Microcebus_murinus | GCA_000165445.3 | 30,608 | Cheirogaleidae | mammals | 1 | zoonomia_cactus | CM007675.1 | 44,838,266 | 44,838,521 | + | 77,693,121 | 44,838,268 | 44,838,518 | 3 | 249 | GATAAAGCTACAAAATCAGTCTTgaaactaaggaaataaaaatgtgcatgGAAGGATTTTCCTGAAAAGGAGCACTTTATGTGCATCTCTTGTCACCCAGCAACTGTTTCTCTGGAGTTCTCTTTAATGGGGTAATTCCAGCTGGCAGCTGGTGCAACCTTGAAATGatcctgtttgtttttcctgctcCCTGATGTGTAGAAGTCATTGCTGATAATAATGTGGTTGCTATTCATTATTATCTGGAGTGTGATA | - |
win_chr17_000387562 | chr17 | 49,607,808 | 49,608,063 | cds | Hydrochoerus hydrochaeris | Hydrochoerus_hydrochaeris | GCA_004027455.1 | 10,149 | Hydrochaeridae | mammals | 1 | zoonomia_cactus | HydHyd_scaffold_10175 | 77,847 | 78,102 | - | 156,673 | 77,849 | 78,100 | 10 | 246 | ccaaCTGGGAAACCACCTGACTCTGCTCACCTGGCACCACAGAAACATCCCGACCTGTACACACCTTTTTGCTCTCCTCCATTTCATGTTCAAACATGGCACTAAAGACTGGAGAACGAGCTAGAAGGCAAAAGGGAAACAAGGAGACGAGGTTATCACATGGGGATCTCTTGATTCTCGCAGTTATGACCAGAAGATCACTTCCTTCCTGATCTACTGCTAAAGGAGAAGGTCTCAGCCTGAGCTTACAGCAGC | + |
win_chr7_000613627 | chr7 | 78,544,128 | 78,544,383 | ccre_non_promoter | Carlito syrichta | Carlito_syrichta | GCF_000164805.1 | 1,868,482 | Tarsiidae | mammals | 1 | zoonomia_cactus | NW_007255852.1 | 109,783 | 110,038 | + | 525,678 | 109,786 | 110,034 | 2 | 248 | AACCACTTGTAAAGCCTGGAAGGTAGTGGAATATCTCCTTTCAGTCAATGTCTTGACTCCTGTCTACAACTATCTACCTTAGGGCATGAGGGATTCATGAGTTCCTGACACAGACACCTGTCTTTTTGAAATTACACTGAAACCACCAATTCATTTTGTAGCAGTTGCTGAACAGCTATCAATAACTTTTAGTCACTACCAGTTTAAGCCAAATTGAAGCCAATGACGTTTGGGTCAGAAGTTTCATATTCCATT | - |
win_chr14_000804754 | chr14 | 103,008,384 | 103,008,639 | cds | Bos taurus | Bos_taurus | GCF_000003205.7 | 9,913 | Bovidae | mammals | 1 | zoonomia_cactus | CM000197.6 | 69,605,459 | 69,605,714 | + | 71,883,091 | 69,605,352 | 69,605,821 | 22 | 217 | GGCTGAGGGCCTGCTGACAGAAAGCAGCAGCTCTGTCaagaagggaaggacggacagacagaaggaaggacagacagaaggaaggaaggtccAGATGTGCAAGGACTGTGGTTCTCACCAGCTGGGCTCCGTGAGACCTTTCCTGACATAGAAACTGCCTGTTTATGGATTTATTTAAGGTGCCTCACTTACCTCTGCTCTTTTCAGCATTTCCCACTTGTTAAGGATTTTCATGGCGTATATTCGTTCAGTGTT | + |
win_chr17_000379244 | chr17 | 48,543,104 | 48,543,359 | cds | Microcebus murinus | Microcebus_murinus | GCA_000165445.3 | 30,608 | Cheirogaleidae | mammals | 1 | zoonomia_cactus | CM007676.1 | 26,454,999 | 26,455,254 | - | 65,901,067 | 26,455,002 | 26,455,251 | 2 | 249 | TCCCTTGCCTTTTGCCGATCGCTTGGAGGGCGCGGCGAGCCCCGGCTGCGCGCTGCTTGGGTCCGGCGGTCCCGAGCCCCGGCTATTGCCAGAAGACGCCTTCCCGGAGCGGCAGGATTCGCCTTTCCTGCCCGACCTCAACTTCCTCGCGGCCGACTCCTGTTTCCAGCTGTCCGGAGGCCTCTCTCCGAACCTACAGGGTTCGTTCGACAGCCCTGTCCCCTTTTCCGAGGAAGACCTGGACTTCTTCACCAG | - |
win_chr14_000271841 | chr14 | 34,795,520 | 34,795,775 | cds | Eubalaena japonica | Eubalaena_japonica | GCA_004363455.1 | 302,098 | Balaenidae | mammals | 1 | zoonomia_cactus | EubJap_flattened_line_35968 | 29,578 | 29,833 | + | 39,935 | 29,616 | 29,795 | 7 | 177 | CTTATAAATTTCTTATAAGAATTTTTATTAACCTTTTGTTTTAGGAAAGAGAGAAATTGCGTGAAGAAAAGAAAAAGTATATGGAATACTTAAAACAGTGGAGTAAACCTAGAGAAGATATGGAATGTGATGATCTTAAGGTATGAGCTTGTTCTGTGATGTTTCACACACCTGTGTAACAGAGGAAATAGCCAGTTAAGCAAATGCTTATATTTAGAGTTCCGAAGTAACATTGTTAGTATTTTATAACAAGCT | - |
win_chr16_000648988 | chr16 | 83,070,336 | 83,070,591 | ccre_non_promoter | Hydrochoerus hydrochaeris | Hydrochoerus_hydrochaeris | GCA_004027455.1 | 10,149 | Hydrochaeridae | mammals | 1 | zoonomia_cactus | HydHyd_scaffold_9927 | 92,603 | 92,858 | - | 159,991 | 92,604 | 92,857 | 5 | 249 | AGCTGCAAGCAACAGTGAATCCATGAACTTGGGTTAAATAGCAACAAAAATGTATAGAAATTTTCCTTTATCTTCTTTTGTTCTAAAGACTAGGTTAACACATATTGATTTTATTTCACAACTTGCTCGGAAATGACTGTCTCGTGGTTGACGTTTTTATGACCTGTAGTTTCCACACTTTTTAATACCCTTGGTGCAGCATTAAAGTATCTTGGTCATAAAAGTTGTCTTAGGAGCGGAAGTTGTTTTAGGGAA | + |
win_chr7_000903322 | chr7 | 115,625,088 | 115,625,343 | background | Mormoops blainvillei | Mormoops_blainvillei | GCA_004026545.1 | 118,852 | Mormoopidae | mammals | 1 | zoonomia_cactus | MorMeg_scaffold_11101 | 81,063 | 81,318 | + | 113,709 | 81,064 | 81,317 | 10 | 239 | ATCTGAAGATCACAGATCTACTGAACTGGCAGGATTCGGTCAATTTACTTAACTGTAGTTTGCAGACTGTCCTGTTGCACAGCAGTGTAGACAATCTCTGAAACTGGAATCCCTACAGACAAGTTTGAGAGGGTGTTGAGTTGCTTCAAATAGTATGATATCTAACACCAGAAAAAATCCAATGCGAAGGAGCTGGCAGAGCTGCACTGCTGTGTTGAGACGCTGCCTTGGAGAAAGTAGAATTTCTGTAAAAGG | - |
win_chr5_000123848 | chr5 | 15,852,416 | 15,852,671 | ccre_non_promoter | Orcinus orca | Orcinus_orca | GCF_000331955.2 | 9,733 | Delphinidae | mammals | 1 | zoonomia_cactus | KB316903.1 | 1,759,061 | 1,759,316 | - | 15,298,998 | 1,759,061 | 1,759,315 | 3 | 252 | TCCATCATATTTGGCACAAAACTACCCTGGTGAGTGAGGAGAAAGGGAATCATTTGATAAGATTTGGAAAATACCATCTGTTTTTCTTAGCATTTCTGGATGAATTTATCAGGCATCCTGTAATTTACACTTTCTGTTGAAAACTATAATTGGATACCCTGCATGGACATGAAGCCTTTGGGTATTTGTCAGAAGCTGTATGAGGACTGTGCCATTTAAGGAGGCCGTGTTTACAGTCAAGGGTAAAATCTGAAA | + |
win_chr6_001214805 | chr6 | 155,494,912 | 155,495,167 | ccre_non_promoter | Lemur catta | Lemur_catta | GCA_004024665.1 | 9,447 | Lemuridae | mammals | 1 | zoonomia_cactus | scaffold_3 | 97,311,860 | 97,312,115 | + | 107,282,566 | 97,311,863 | 97,312,111 | 3 | 246 | tatagtgccaagaggaagtataatgagaaataataccacgaaatttactaaaggaaactgtgggatctgaattagaaacattttttcaaattagagcttcaaaatctaatgtgttttggcactgtctcccaagggcagccatagaaggcctttgaagagctctgcacagccttggttggaacgattgaagcaacatgccctttagaaaatgaaaagcctttctggaggatggttgtacaatttctttcaacacaa | + |
win_chr8_000901872 | chr8 | 115,439,488 | 115,439,743 | ccre_non_promoter | Giraffa tippelskirchi | Giraffa_tippelskirchi | GCA_001651235.1 | 439,328 | Giraffidae | mammals | 1 | zoonomia_cactus | LVKQ01S006526.1 | 77,083 | 77,338 | + | 391,723 | 77,083 | 77,338 | 1 | 255 | CATGTCATAACACTGCATTTCTGGACATTCAGCAGAAGAGACCAACGGCTGGAAGGTTTAGTCTTCCAGCTGTTGCAGAGGAGTGTTTAAAAGTTGCTTGTTAGCTGCAAAGTGCTAATAATAACGTAAACACGGTACAGAATGTCCCCTGTAGCTAATGAGTAAAAGCTCTGCTCTTTAAATCTAatgttttcattatgaaaataaatttcagttttacCAGCggtttgctttaaaaacaaacttggTGAAGAC | - |
win_chr2_001538067 | chr2 | 196,872,448 | 196,872,703 | cds | Octodon degus | Octodon_degus | GCF_000260255.1 | 10,160 | Octodontidae | mammals | 1 | zoonomia_cactus | JH651540.1 | 3,853,177 | 3,853,432 | - | 20,573,850 | 3,853,179 | 3,853,429 | 10 | 243 | CTTTCGATGTGGCCGGAAGTATCACTGTAGTAAGGGGTCTGCTATGTAGCTTCCTCTGCAGCCATGCATTGGGTGGTGCTGAGTGTCGCCCTCACTAGCTTGTTTACCCGCATTTTATATTCGAGAATTGATACTTAGGTTGTCTCTTCAGGGTTCCATCGTCTACAGAAATTTCTCTGAAACTTCACGTTGCTCAGCCAGAAAACGACAGCCATGTggcattattgaaaatgtacacATCATCAGACTGTCAGT | - |
win_chr9_000971856 | chr9 | 124,397,440 | 124,397,695 | background | Pithecia pithecia | Pithecia_pithecia | GCA_004026645.1 | 43,777 | Pitheciidae | mammals | 1 | zoonomia_cactus | tarseq_166 | 2,901,999 | 2,902,254 | + | 7,229,321 | 2,901,998 | 2,902,255 | 3 | 255 | ATCGAGCTGTGCCCGCAAGTTAAAGATGAGCAAGACAAGACAGGTGTCTTCTATTTAATGTAAATTAAGAGCAGCCTTCAGGCGCCTGGCTAGTCGCCAATACAGGCCCATGGGTAGACAAAATTTAGACACCCTTGTATTCCGGTTAATTTGTAGCTTCCAGCTCTTACTGTCAAATCACTCAGGAAAAAAGAAAAAAAAGATTAATTACAAAGTTTTACTTTTATTTTTCATAATAAAAAACTCATAATCTAA | + |
win_chr14_000753738 | chr14 | 96,478,336 | 96,478,591 | ccre_non_promoter | Dasyprocta punctata | Dasyprocta_punctata | GCA_004363535.1 | 34,846 | Dasyproctidae | mammals | 1 | zoonomia_cactus | DasPun_flattened_line_77925 | 12,491 | 12,746 | - | 16,490 | 12,459 | 12,778 | 9 | 208 | ggcgatcctcttgcctcagctcaagtgctgagatcacagttgagcgccaccaccccggcCCCGGAGGCCAGTTTGACAGGCCCTTTACGGTACTGCGCGGTGCCATTGCTCCACCAGCACCGGCTTTACTCCACTCTGAGCCCGGCTCTTCTGCTCCCAGAATTTGTTTGCGGTTTGGATGCCTCGGATGAGTTTCTGAAGGAGCGGGTGATAAACCTCCCGGAGAGCGTCGTGGCTGGGACACACTACACCCAG | + |
win_chr16_000535219 | chr16 | 68,507,904 | 68,508,159 | ccre_non_promoter | Ursus maritimus | Ursus_maritimus | GCF_000687225.1 | 29,073 | Ursidae | mammals | 1 | zoonomia_cactus | KK498676.1 | 4,598,087 | 4,598,342 | - | 8,333,544 | 4,598,085 | 4,598,344 | 14 | 247 | gagaaaaaaacaaaacaaaacaaaacctgaaagcaAAGTCAGTTGCTAATATTTCTAAATAGCTCTAAATCAAACAAGAGGAATGTGACCACTTTACTTAATTGTGGTGGGTTTGTGATGCATTTTCTCTATGGGTTAGGAAAGCAATTACCATCAAACAACCTACTTGTGCCTCCATTGTGATAAAATGTTCCCTCTAATGGGGCTGACATGCCAAGCAGAAGGCCTTTTAAAGCACTTAATGCTTCCGGAAGT | + |
win_chr5_000333594 | chr5 | 42,699,904 | 42,700,159 | cds | Mus musculus | Mus_musculus | GCF_000001635.26 | 10,090 | Muridae | mammals | 1 | zoonomia_cactus | chr15 | 3,333,191 | 3,333,446 | - | 104,043,685 | 3,333,193 | 3,333,444 | 8 | 240 | ATTGAGATTATATCAGTCTTCCTCTAATAACAAGTTATAGGGCACATAATTTGGAAATATAGTCCTAGGTGAAAAGAAAGTGTTATTACAAATAAGAAAGTGAGTATTGaattagaaagaagaaaagtcaaTGTATAGAATGGAGTGACTCTTACCACTTTCCATTTTGATTCATTTACTTCTTTGTACTGAATTTCATACTCCAGAATTATCCATCCCTTCAGAACATCTGCATTGGGTGGTGGTTGCCAACTC | - |
win_chr1_001425001 | chr1 | 182,400,000 | 182,400,255 | cds | Rhinolophus sinicus | Rhinolophus_sinicus | GCA_001888835.1 | 89,399 | Rhinolophidae | mammals | 1 | zoonomia_cactus | LVEH01000001.1 | 7,288,060 | 7,288,315 | + | 8,436,838 | 7,288,063 | 7,288,311 | 2 | 245 | NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAGGGCTCAGCAGGGGTGGAGCTACAGACTCATTCTCTGCTCATCTTGGTGACGTTCCTGCTGATGCTGGTGTTGACCATACAGCTGTGGGCTCCCGACGCAGTTCACCTCTCACTGATCGAGACCTTTCT | - |
win_chr5_001109147 | chr5 | 141,970,688 | 141,970,943 | tss_region_and_utr5 | Aotus nancymaae | Aotus_nancymaae | GCA_000952055.2 | 37,293 | Aotidae | mammals | 1 | zoonomia_cactus | KZ203792.1 | 13,243,330 | 13,243,585 | - | 42,888,418 | 13,243,330 | 13,243,585 | 1 | 255 | GGCTCTGCTTAAGCTGCATCCCTGTCTAAGACACATTTACATATTCTACTTGAGGTCAGTTAGTACCTGTTAATAACAAtcagaagaaaaggatattaaCACCGAAGTCTGTATTTCAGTTCAGAGTGGACTTCGCGCACATCCCATTTATTCTCTAGCTGGTGGAGCTGAGACTGCTGAAGCTGGATAAGAGGCCCGGATGTGGAACTCATATTACAAATACTATAAAAATCCTGCCATCTgcagaaaagaaac | - |
win_chr16_000116371 | chr16 | 14,895,360 | 14,895,615 | cds | Tapirus indicus | Tapirus_indicus | GCA_004024905.1 | 9,802 | Tapiridae | mammals | 1 | zoonomia_cactus | TapInd_scaffold_13438 | 17,345 | 17,600 | + | 94,964 | 17,346 | 17,599 | 21 | 229 | CCTGTCTCTTTGCATCTTCTGGGCCGTTGTTGTCCGAGGCTGTCTGACCGAGAGCTCGGACTCCCTGCAGTCGACTTGTCAACTGCAACAGCAAGGGAATGAGCTAGAAACAGAGAGAATATGAGTGAGAGGGATTCCAGCAGAAGACCTCTGCCCAGGGGGACATCGCAGCCTCCCACACAGCACACCTGCTCCCTCAGGTCACCACCCACTCCGTGCTggggagtggacttcagtttacagtaagggaggcct | - |
win_chr20_000086872 | chr20 | 11,119,488 | 11,119,743 | ccre_non_promoter | Mus musculus | Mus_musculus | GCF_000001635.26 | 10,090 | Muridae | mammals | 1 | zoonomia_cactus | chr2 | 137,568,516 | 137,568,771 | + | 182,113,224 | 137,568,512 | 137,568,775 | 7 | 249 | AGCAGCATATGTtttctatttggaaaaaaaatataggaCTATAGGGCCATCATTTCAATCTGGCCGGTTCACCTTGCTTTGAATGTGACAGTCCAGTAAACAAAACAATACCTCCCAACTATTCCAAATGACAGAATGAGCAGCCATCCTTGATATGCTAGTGTGTacatctctatttcttttttttttcccttttattggaAGTGACAAGTAGTATTTCTGCATTAAATTAAATCTGGCTCACATGGAGCTCTT | + |
win_chrX_000232451 | chrX | 29,753,600 | 29,753,855 | background | Orcinus orca | Orcinus_orca | GCF_000331955.2 | 9,733 | Delphinidae | mammals | 1 | zoonomia_cactus | KB316979.1 | 2,455,397 | 2,455,652 | + | 5,136,846 | 2,455,400 | 2,455,648 | 5 | 244 | TATTTCCGGCTCTGCATGGTGCAATACTgattaaaaacttgtcaagctatcagaagaataaggccatttcccagcatggaatgatgttatttattctaggcccaatgattggtaccaggaccaatgCCTAATAATAATATCTGTGACCAAGGGGAgagagtcatttaaaaatgatcactCTTATCACAATCCTAAGGCATTTGAAATTCTGACAATGCTGAAATAATTGTGCAACTTTAAGGAAATGTATAAGAA | + |
win_chr12_000485190 | chr12 | 62,104,192 | 62,104,447 | background | Oryctolagus cuniculus | Oryctolagus_cuniculus | GCF_000003625.3 | 9,986 | Leporidae | mammals | 1 | zoonomia_cactus | CM000793.1 | 41,088,421 | 41,088,676 | + | 91,394,100 | 41,088,421 | 41,088,675 | 6 | 249 | aaaaagtgacaaATGTGCCACTAAACTAATCCTATCTTCACAATAGCTTTCACAGTTGAATTTGGAATACTTttctcttacaaaaataaaatgctaatgaaatggtcttgttttctttttttacataatACTGATTAATCCACACTGATTTTAGCCACTAGGGTTCTCCCTGCATTGAACATCTGATttaagaaggagaggcagagcataATTAAAGGCACAAAATGGGCAATGTGTTGCTTTTTATATCAGCCC | + |
win_chr1_000734489 | chr1 | 94,014,464 | 94,014,719 | cds | Miniopterus schreibersii | Miniopterus_schreibersii | GCA_004026525.1 | 9,433 | Miniopteridae | mammals | 1 | zoonomia_cactus | MinSch_scaffold_692 | 297,989 | 298,244 | - | 317,764 | 298,029 | 298,203 | 3 | 173 | TATCCAAGGGTACAGCAGATGGAGTGGAAATTGGCACTCCGTCCCACTGAGCTGTGTCATTCACACAGATGGGCAGTCATCCCCATGATGTACCCAGCATCCTTCCTGTTTGATGTCCCCAGCACTGCCTACGTGGCCTTGTCCTGTGCTAATCTCTTTATTGGCAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn | - |
win_chr7_000047970 | chr7 | 6,140,032 | 6,140,287 | ncrna_exon | Macroglossus sobrinus | Macroglossus_sobrinus | GCA_004027375.1 | 326,083 | Pteropodidae | mammals | 1 | zoonomia_cactus | MacSob_scaffold_7898 | 19,428 | 19,683 | - | 102,053 | 19,390 | 19,720 | 13 | 228 | GGCCGTGGCATCCGTCACCTCTGTGGAGCGCTCCTCTCATGTCACTGTGTGTTTTTCAGATTGGACAGACACACGCAGGCCACCACGCTCGTCTGTCAGATATTTGGAGGCTACCTAAGGTCTAGAGGTAACTTTTCTTTAAAAACTGATACAATGGGCGGGGAGGGGAGGGAGGGAGATAGGCTAAAAGGAGTCAAATGGGTGGCGCCATTAAAGAACTAAAAATAAGTTTGAGAAAAGTTGATAAATTGACGC | + |
win_chr21_000330392 | chr21 | 42,290,048 | 42,290,303 | cds | Choloepus hoffmanni | Choloepus_hoffmanni | GCA_000164785.2 | 9,358 | Megalonychidae | mammals | 1 | zoonomia_cactus | KN186910.1 | 245,080 | 245,335 | + | 377,653 | 245,080 | 245,334 | 13 | 243 | GGTCCTGACACACCTGCGGATCACGTCACACATTGGAATCGGCCTCCTCATTGGCCTGCTCTACCTGGGGATTGGGAATGAAGCCAAGAAAGTCTTGAGCAACTCAGGCTTCCTCTTCTTCTCCATGCTCTTCCTCATGTTCGCGGCCCTCATGCCCACCGTCCTCACATGTGAGTGACCACCCCACGCACCTTCCTTGCTGCCTGGGTTTCCCACCCAAGAATGCAGGACCGAGGTCCTGGCTTGTCCTGTAGA | + |
win_chr2_000515626 | chr2 | 66,000,000 | 66,000,255 | ccre_non_promoter | Chinchilla lanigera | Chinchilla_lanigera | GCF_000276665.1 | 34,839 | Chinchillidae | mammals | 1 | zoonomia_cactus | JH721884.1 | 18,623,386 | 18,623,641 | - | 28,497,232 | 18,623,387 | 18,623,640 | 7 | 247 | TACCACAGGAAAGCTGTTaacatgagtttttaaaataaaagctgttaaGTTATGCATGCAAAGTTAAGGAAATCATTTGTATGAAGAAAAGGTGATTAGGATATGCATTGTTAGCTGATAGAATACTGTCACTGGGCTCTAATTAGGGCCATAAATCACACAAAATGATGTGTGTACATAGATAGGGCTTAGAGCACCAGAGTGATGCATGCCATCGACAGTGAGATAGATGATTCCCCCTGACTTTCATGGCTG | + |
win_chr3_001406391 | chr3 | 180,017,920 | 180,018,175 | ccre_non_promoter | Ctenomys sociabilis | Ctenomys_sociabilis | GCA_004027165.1 | 43,321 | Ctenomyidae | mammals | 1 | zoonomia_cactus | CteSoc_scaffold_1507 | 170,780 | 171,035 | + | 177,803 | 170,797 | 171,017 | 4 | 216 | TGGGAGGAACATGGCATGAGTTGGGGGTGAGCAAACTGCCTTTGAGGGGAAAGAACACATCAGTGTAATATATGCGCTCCATACTGTGCCTAACCCACGATGCAACCCTAATAAACACAGATCACTAAAATCCAAAGAAAGCTTTTCTGATTTCCAGACTGTGGGTGCTAAAATAAAATCTGAGAAACTCAGAGCAAACCAAGATCTTTTTGGCACATCTGACATCAACTTATCCTAAATCCTCATACTTTACCT | - |
win_chr13_000572456 | chr13 | 73,274,240 | 73,274,495 | ccre_non_promoter | Phocoena phocoena | Phocoena_phocoena | GCA_004363495.1 | 9,742 | Phocoenidae | mammals | 1 | zoonomia_cactus | PhoPho_flattened_line_40768 | 12,180 | 12,435 | - | 24,333 | 12,184 | 12,430 | 3 | 244 | ATTCATTCACATCTAATTTTGCAAGCTTGAGATGCCTGGATTTTTTATTCATATTTCTGAATCACCACGGTAATCTTTGCTACAAATCATGGTAGAAATTTTAACTGTGAAGTTATTTCCTGTCATGGCAAACAACTTAATTGAGAAGCTTGATTATCCCCTTGGCCTTCAAAAAATCCCAGTGTACCAAGAGATTGAATCCAATTTAAATTCCTTTGTAGGGTAAATTCTTCAGTAATGTAATAATATCATCCT | - |
win_chr6_001250270 | chr6 | 160,034,432 | 160,034,687 | ncrna_exon | Tragulus javanicus | Tragulus_javanicus | GCA_004024965.1 | 9,849 | Tragulidae | mammals | 1 | zoonomia_cactus | TraJav_scaffold_533 | 161,724 | 161,979 | - | 371,722 | 161,741 | 161,961 | 14 | 154 | TACGCGCGGGATGGGGGTCCTCCTGCCCGCCACCACAGAGGGGGCCACAGGGGGCCCACGTCTTTGGGAGGACGTCTGCCCGTGGCCCTCTGCTTCCACGACCCCGGCCCACCGACGCAGAGCCGCGGCCGACCCCGGCACCCTCACCTGCCGTCTGGTTGCACTCGAAGTTGATGACGCTCATCCGCTGGAAGCCAGAACTGCACTCCTCGCCCCCAGAATAGATCAGGGTGAGGTCTCCATCCGAATACCTAG | - |
win_chr17_000637063 | chr17 | 81,543,936 | 81,544,191 | ccre_non_promoter | Zalophus californianus | Zalophus_californianus | GCA_004024565.1 | 9,704 | Otariidae | mammals | 1 | zoonomia_cactus | ZalCal_flattened_line_10520 | 63,133 | 63,388 | - | 132,699 | 63,143 | 63,377 | 14 | 194 | CCCCATGCAGGCGGCCCCCATCGCCCACAGGCCCATGTTCCCACCACTGCCCCCCCTTCCCGAGCAGGCCCACATACCTGCAGACGCCCGATGACCGCATGGTGTGCACTGCACAGGCTGGCCAGAGAGGAGCTCTCCACCTGGATCTCCACGGTCTGCATGGGCCCTGCTGTGCACAGGTGGGTCACAGCCACCTGCAACACAGGACAAGTCTCACCAACCATGCACGGCCCTGCCCCACCCCAACGGCAGCTC | + |
win_chr10_000084506 | chr10 | 10,816,640 | 10,816,895 | ccre_non_promoter | Nycticebus coucang | Nycticebus_coucang | GCA_004027815.1 | 9,470 | Lorisidae | mammals | 1 | zoonomia_cactus | k141_6807547 | 6,726 | 6,981 | + | 9,929 | 6,746 | 6,960 | 3 | 214 | AAGGAAAACAGGTCCTATCTTAAAAATACAGATACACAAACTTAGTATTACTCAAACTAATCATACGGCCCTAATGTGCTACCTTGGTTTTCCATTAAACTCTCCACAGGTGATTCAATATATTCCAGATCCAGGTAATGGATTAAAGTTAAGGAGATATTCTTTTAAAAAGACAGCATGTGGCCATGGGCCATACTAGCGTTTTCAATATGAAAACCTCAAGCATATGAAAGATAAAGTATGTTAATATGCGTT | + |
win_chr7_000310206 | chr7 | 39,706,240 | 39,706,495 | utr3 | Microtus ochrogaster | Microtus_ochrogaster | GCF_000317375.1 | 79,684 | Cricetidae | mammals | 1 | zoonomia_cactus | JH996432.1 | 24,946,658 | 24,946,913 | - | 25,865,132 | 24,946,659 | 24,946,912 | 6 | 251 | TTATAATGGAAGCCCAAACTCCTTTCTTATCCTGACCATactaataaatgtaatttataagcATTGCCATTGAAGGCTCATTGACTGAAATTACTCTAACATTTTGGAAATTGTTATGTGTCACTAAAAGCATGAATCGGAACTGCACTGGAAGTCAAattcacttaaaaaagaaattgtgtgGCTTCACCAAGAAGCAGAGCTCAACTTATTTCATAATTGCCTACATTTATCACAGTCCTGAATGTAGCGTGT | + |
win_chr5_000706246 | chr5 | 90,399,360 | 90,399,615 | cds | Manis javanica | Manis_javanica | GCF_001685135.1 | 9,974 | Manidae | mammals | 1 | zoonomia_cactus | JSZB01031848.1 | 27,179 | 27,434 | + | 132,075 | 27,177 | 27,435 | 4 | 243 | CCATCACCATCTTTATCAAATTCTTCTATCATAGCTCGAAGTTCTTCATCACTCATGTTTTCACCCAATTCTCTGGCAACACGTCGCAAATTTCTCAAGCTTATTTTACCTGAATCATCATCATCAAATAGCTTAAATGCCTTCAATAATTCTTCATGTGGATCTCTTTCCAATACCCAGTCTGTCactacagttaaaaaaaacaaaaatataaaaaataaacctttataatAACAAAGGCATTCATTTGTGGTA | + |
win_chr4_001118718 | chr4 | 143,195,776 | 143,196,031 | ccre_non_promoter | Petromus typicus | Petromus_typicus | GCA_004026965.1 | 10,183 | Petromuridae | mammals | 1 | zoonomia_cactus | PetTyp_scaffold_38771 | 20,234 | 20,489 | - | 32,030 | 20,245 | 20,477 | 8 | 224 | AAAAGTTATTTTAATTACCTATATTTAAGTGACATACTCTAACATTCTAAAGCCTATTCCAAACAAAATCCAGACCAGGAACATATTTAGATGTTTTAAAGTAGACAACCTTAAGATAAAAATACTGATTGTATGAGCCTATACACCCTAACAGATTTATAAACTCACACTTACCAGTTCTATTTTTAGCAGTGTGACATCTATCAAAATAGTAAACTTCTGAACAGCTGCTAATCCTTTTAGGAGTGCAATGAC | - |
win_chr2_001736088 | chr2 | 222,219,136 | 222,219,391 | background | Kogia breviceps | Kogia_breviceps | GCA_004363705.1 | 27,615 | Physeteridae | mammals | 1 | zoonomia_cactus | KogBre_flattened_line_74705 | 6,105 | 6,360 | - | 19,694 | 6,099 | 6,366 | 3 | 255 | TTTATTAGAGATCACTTGGCCCAGGTGGCGAGGAGAGTTGCCCGCTGAATTTGGAGAAATGTCACGAAGGGGTTGCAATCTATAATTGCAATCGAGAATCTCTTCAGGGCTGAGAGTGAGAGTTTTAACAGCTTTATCTTTTCTTAACCCCCTTTTTCCTCTTGGTGGTTAGAAAAACAGAGAGAAGCTCAGAATGACACAAATGAAAAGTGAAAAGACAATTATACTCAATTACACACTAATCACTGACTATCA | - |
win_chr8_000335999 | chr8 | 43,007,744 | 43,007,999 | cds | Chrysochloris asiatica | Chrysochloris_asiatica | GCA_004027935.1 | 185,453 | Chrysochloridae | mammals | 1 | zoonomia_cactus | ChrAsi_scaffold_566843 | 2,749 | 3,004 | - | 3,588 | 2,776 | 2,976 | 9 | 189 | GCCTATTTCTTAAAGAAATCATTTTATATAAACATAATACCATTAGGAAAGTACATGGCTAATCCAACTTAAAGTTATAGTATAGGAAAAACTCACAGCTATTGTTAAATCTTGGTTCAAGATCTTCAATAATGGCTCTCTTCTTCTGCAGTTCATTATTGGCTTCATGTAGCTTCTCTCTGTTACAAAATATAGTATCACCTATTACTGTTTCTGTAGTTCTTCCCAACAAAATGAGGTATGCATGTATGTGTA | - |
win_chr16_000107287 | chr16 | 13,732,608 | 13,732,863 | ccre_non_promoter | Cryptoprocta ferox | Cryptoprocta_ferox | GCA_004023885.1 | 94,188 | Eupleridae | mammals | 1 | zoonomia_cactus | CryFer_flattened_line_404 | 147,907 | 148,162 | + | 642,282 | 147,907 | 148,162 | 1 | 255 | CTTAATGGAAAACATATAATCAATGTTTCATAATGTTTTTAGAATCGGAGGATATGTAAGTTTCGCTCGCTATAATTTCTTTCCCAGACCTCATAAATAAACAATGACTCTTTTTCCCCATGTTGGACTGATTTATAGGCAGATCTTTAAGTAAAGTGCTTCCattcattactaatgcattgcataatgcattgtaataagtgaatagagtttgaggatgatcatttaacatattaataaagcatCAGTGTCATT | + |
win_chr1_000465633 | chr1 | 59,600,896 | 59,601,151 | ccre_non_promoter | Odobenus rosmarus | Odobenus_rosmarus | GCF_000321225.1 | 9,707 | Odobenidae | mammals | 1 | zoonomia_cactus | KB229387.1 | 454,762 | 455,017 | + | 1,415,034 | 454,766 | 455,013 | 9 | 235 | CAGGTTGGGAATTTTAGAGGGTAGCCACAGGCATGTGTGGGGCTGAGTATTTCCGTGGtggctcatctctccctccaaacGGACCGTGCTATCGTCTTACTAGGAAAAAAACCATTTACACACATTCCAGCCAACTCCCAGCTCACTCCACAGTACAAaaaagagcacagagaatttGGTTTTTGAATGGGGCTCTTAGCCTTGACCTCTATTTCTGTACTTCTCAGATTAAGCTGTAATGAGTTGGGTGCCCCT | - |
win_chr5_000696002 | chr5 | 89,088,128 | 89,088,383 | ccre_non_promoter | Dasyprocta punctata | Dasyprocta_punctata | GCA_004363535.1 | 34,846 | Dasyproctidae | mammals | 1 | zoonomia_cactus | DasPun_flattened_line_1050 | 209,475 | 209,730 | - | 210,944 | 209,476 | 209,728 | 5 | 250 | CAGAATTTTAAATAAAGCTTCTACAACAAAGTTCAGTGTTCCAAAGCTTGAAATAAAGCTGAATTAAAGCAGCACTCCATCACTAAGGTGTTTAAATCGGGTCCCTGATCCCTTCTCCCTTTAAACATGGCTTGGCATTTTAGGGGAGAGTAGTGTAGACCTGGGATTGCTCCACACAGCAGGGCCTGGGACCACCTGCATGGCAATGCCCAGGGGGCTTCCCAGCAGCAGACTTTTGGGCCTGTCCCCGTCCCC | - |
win_chr14_000597909 | chr14 | 76,532,224 | 76,532,479 | ccre_non_promoter | Mesoplodon bidens | Mesoplodon_bidens | GCA_004027085.1 | 48,745 | Ziphiidae | mammals | 1 | zoonomia_cactus | MesBid_scaffold_12872 | 63,972 | 64,227 | - | 69,265 | 63,973 | 64,226 | 11 | 240 | CTGGATTTTCTACTCATAAAATTTATCGTAAATTTTTAATCATAAAATTTGTTCTATGGCTTGCCTACAAACGGAACTTATGGCTTCCCTGGAGGGGGGaattgctggaatcggttttcttcctgtttttcaagcccagtcccatgttcttcctctctacaccatctcccatggttcactctctttttgaaagtaaatgtcaagagttccttaagttcattagctaatttggccagaccttttagtttgtgtgct | + |
win_chr21_000259279 | chr21 | 33,187,584 | 33,187,839 | ccre_non_promoter | Tolypeutes matacus | Tolypeutes_matacus | GCA_004025125.1 | 183,749 | Chlamyphoridae | mammals | 1 | zoonomia_cactus | TolMat_scaffold_105767 | 9,951 | 10,206 | - | 16,121 | 9,952 | 10,205 | 2 | 253 | AATACAAAACAAGCAGTGAAAGTCAAAATAATTACCTGCAAGCGACTGTGTATGTTTCTTTCATCTAATTAGGTAATCTGCCCAGGTGTTTAGCACCAAGGTTTCTATGCTTTAATTGGAAAAAGTCAAGGACAGAAACTAATTAGCAGCATTAATCCAAACCAGAAGTCTAATGATATTAACCACAAATCACCGTTGCAATCAGGAAACTTTACTCAAAGACATTTTCAAAGTGGAGGAGGGGAGGAAGAAAAG | + |
win_chr17_000425201 | chr17 | 54,425,600 | 54,425,855 | ccre_non_promoter | Balaenoptera acutorostrata | Balaenoptera_acutorostrata | GCF_000493695.1 | 9,767 | Balaenopteridae | mammals | 1 | zoonomia_cactus | KI537600.1 | 1,832,481 | 1,832,736 | + | 2,746,628 | 1,832,477 | 1,832,739 | 5 | 254 | CCTTCCTGCTTTTGCCAACATTTTCAGTGTTAGCAAACAAGCATCAATCACCAACCTGATGAGTAAAATTAAGGCTTCTCTGTGCAACTCGGTGCACAGACTGGACTGAAATTCCAGGTTGAAGAATTCATCTTTGCCAATATTGcaacaatatataataaaagtaacaATAGTCCATATAACAGTaatcatggctaacttttattgaggactactatgtgccagacactgttttaaatgccttccatggattat | - |
win_chr1_000640938 | chr1 | 82,039,936 | 82,040,191 | background | Paradoxurus hermaphroditus | Paradoxurus_hermaphroditus | GCA_004024585.1 | 71,117 | Viverridae | mammals | 1 | zoonomia_cactus | ParHer_flattened_line_880 | 7,867 | 8,122 | + | 301,420 | 7,869 | 8,119 | 7 | 245 | AGGATTTACACTTGGTGATAGATTGATTTATTACATTTTAATGTAGTTTAATCTTTCAGTCACTTACCTTTTACATATCCCTTTCTGTTATATAAGAAGAGGACTTTCTATTGTTTGCTGACATTTAAAATTCTTTTAATGGGGCCAAATTGTTTTTGGACATAAATACTACTGAAACTTACTTTCCACAAATCTGTGCTGATGGTAAATGTAATTTAATATTTTTTGCTGTaataatagctcccttttattgaa | + |
win_chr9_000116089 | chr9 | 14,859,264 | 14,859,519 | cds | Anas platyrhynchos | anaPla1 | BGI_duck_1.0/anaPla1 | 8,839 | Anatidae | birds | 2 | ucsc_multiz100way | KB743030 | 474,635 | 474,890 | - | 931,865 | 474,643 | 474,881 | 4 | 238 | AATTCATTTCCTCCTATCACCTGCAGGTTTACAGAAACCGAAACGTTTGTAGAAACATTCACTCTCCACGTGCAGTTACTTGAGCCAGACTGTAACATCATCAAAATGCGCTCCCAAGCCTTGGAGGTGCCTGAGTACTACGGTCTGTCCAGGGCAATTGACAAGAATGTCCTCACTTTTGACTACGACAGGAAGATAAATCTGGAATGTACCATTTCCATAGCCTCTTCGGAAACCCACCTACCTGCCCATGGC | - |
win_chr5_001145999 | chr5 | 146,687,744 | 146,687,999 | ccre_non_promoter | Tolypeutes matacus | Tolypeutes_matacus | GCA_004025125.1 | 183,749 | Chlamyphoridae | mammals | 1 | zoonomia_cactus | TolMat_scaffold_3938 | 53,107 | 53,362 | - | 63,260 | 53,093 | 53,375 | 7 | 250 | TTTACTAATGTGCTCTGCTCTTGAAATTTGCATCATCAGCAATTGTGGCGTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTTCTCCCCGTACCATGATTACCTCTCGCTCACTTTCATAGTTTCCAGTTCTACGTAGATCTTGAGCAAGAACATTTAATAATATCTGACAGCTAATTAATCCTCATTGAGTAGTAAACCTGTTCTGTTTCAGTTCTGAGAGGCTCAGAATTTCAAAGTAAGAATGTGGTGTTTTTT | - |
win_chr9_000037822 | chr9 | 4,841,088 | 4,841,343 | cds | Ara macao | araMac1 | SMACv1.1/araMac1 | 176,014 | Psittacidae | birds | 2 | ucsc_multiz100way | KE008103 | 12,397 | 12,652 | + | 20,158 | 12,440 | 12,608 | 14 | 159 | TTTCTGACAGAATGCCTTAGGACCTCTTGGCCACTTGTATCAGTCTCTGGATTAAACTTCTTGTGTGACCACAGTGAATTCCTTAGCTTGAAAATGTAGATATTCTGTCAGAGTGTCACCACAGATGGCAAACAGAATAGTGGAATCTGCAAGGAGCATCCTGAATAAATTCCTTCCCGACATTTATATCTACACAGATCATATGAAAGGGGTCTCTGAGGgctttttcctgcctctgcaaCTGCTGTCTTCCTT | + |
win_chr15_000533545 | chr15 | 68,293,632 | 68,293,887 | utr3 | Pelodiscus sinensis | pelSin1 | PelSin_1.0/pelSin1 | 13,735 | Trionychidae | reptiles | 3 | ucsc_multiz100way | JH211347 | 1,527,661 | 1,527,916 | + | 4,520,399 | 1,527,702 | 1,527,875 | 12 | 151 | GAGAACACTACCTTTCCGACCAGAACATTTGGGGTAATTGTTTTCCTGTTCAACAGGAGAATGAGCTGCGGAGGAGTTTCCTTTAACTAACAATTTCATCTACAGACATCCCAGGCATGGGTTTGTTCCAAGAATGGCTTTATACAGCTATTTCCCCAGAATACACCATGTGGATTATTTTACACATAAATATCCCATCTTGAAGAAAATAGTGCAGAAGGTGGTCTCTCTCAGTTAACAGTACACAAATTGGAA | - |
win_chr12_000633692 | chr12 | 81,112,448 | 81,112,703 | ccre_non_promoter | Cuniculus paca | Cuniculus_paca | GCA_004365215.1 | 108,852 | Cuniculidae | mammals | 1 | zoonomia_cactus | CunPac_flattened_line_42393 | 6,065 | 6,320 | - | 17,663 | 6,052 | 6,332 | 5 | 253 | TAAAGGCCATATGGAACCAGGAGCAGGGAATCAAAGTAGAACACAATGCTCCCTCTCTTTCCCAACAGTTCTGCCTTTATTACTTCGGGGAAGAAAAGCCTGAGGAATCAGAGGCTGTCAGCAGGTGAGAGAAACAATCCTTTTAAGTCCTTTGATGTCAGGCTAAACTGAAAACCAGTGAACTAGTACAAACGTCAAAAGAGTCTAAGAGTCTAGATCAGTGTTTGAAAATAAGGTGTGTCAGCAAAAAACTGT | - |
win_chr16_000588233 | chr16 | 75,293,696 | 75,293,951 | utr3 | Daubentonia madagascariensis | Daubentonia_madagascariensis | GCA_004027145.1 | 31,869 | Daubentoniidae | mammals | 1 | zoonomia_cactus | ctg70 | 883,930 | 884,185 | - | 6,535,551 | 883,932 | 884,183 | 4 | 251 | AGGCGAGTGAGGTCATCGTCTGCACTAGCCTCTCATAGGACCAGCTTTTATTTATTTATTTATTTCAGGACAAACTTTTAAAAGTAAAATAAATGAAACCATGTGAGATCAAGATACACAGACAGAACTTCAATGTAGAAAAAAAGACCTTGCTGGGAAACAGTCGATAAGAAACACTGGAAAACATTTCACAGATGTCTAAGAAGCTCACATTGTAAACAGGATTAAGCTGCTATCGATTTTGCCTGTGACATC | + |
win_chr12_000541152 | chr12 | 69,267,328 | 69,267,583 | utr3 | Ceratotherium simum | Ceratotherium_simum | GCF_000283155.1 | 9,807 | Rhinocerotidae | mammals | 1 | zoonomia_cactus | JH767750.1 | 25,401,804 | 25,402,059 | + | 27,476,936 | 25,401,810 | 25,402,053 | 8 | 237 | CAAGTGTTCCTCTGTGTTATAATTTTACTTAGTGCTCACTTTACAGACTTCATGAAAGAGCTGTAGATTGCATTTGTCTTAGTTTTTTAACTGTTTACATAGATCTTCCTTTTATAGCTGATAGCTTAAAGCAAGTAATTGTGTGGCTTTGACAAAAACAGATTTGACCAAATGGTATTTTGAAAACATGAGCATTGAATGTGTTTGTCACTTTTAAGCTTCTTTTTGATATCTTTGTTTATGTAGATGTCTACT | + |
win_chr10_000386418 | chr10 | 49,461,376 | 49,461,631 | cds | Manis javanica | Manis_javanica | GCF_001685135.1 | 9,974 | Manidae | mammals | 1 | zoonomia_cactus | JSZB01001431.1 | 22,064 | 22,319 | + | 271,350 | 22,070 | 22,312 | 8 | 236 | CAGAAATCCCCCTGCAGCCAGTCCAGGTGGGAACACCAGACACTGCTCCCAGACACTGCTGACGAGACAGTCTCAGTGCTTTCAGGGCATCCTGGGCCACTCGGCTGGCTTCTGCCTCCACCAGGACATAATCTGGACTGGCTCCATCTATGATGGCATCATGTTTCATGACACTGTGCACACCAACTAGCAACCACAAAGGAAACAGTGAACATGTTACTTCAGTTTGTATGCCATCGTATTTCTTCTGTATAG | + |
win_chrX_000144639 | chrX | 18,513,664 | 18,513,919 | background | Spilogale gracilis | Spilogale_gracilis | GCA_004023965.1 | 30,551 | Mephitidae | mammals | 1 | zoonomia_cactus | SpiGra_flattened_line_9842 | 17,423 | 17,678 | - | 117,364 | 17,424 | 17,677 | 10 | 242 | AGGTGTGATTTTTTTATATATCATGGTTACAACAGGGAGGATTATATCCATTTTTAAATATAACATGAGATTTCATAGTAATCCATCTGTTTGATCCCAAAGGGTAAATCTTAGAAGCATCAAATTCTCTCTTCTTGGATAATGCAGTAAAGACTGAAGCTCTGACTCTAGTTGAAAAGAGGATATATCTATAACAAGTctaatgactaaacagctgcagattctaaaaaaagttttatattactctgaggtagg | - |
win_chr14_000491798 | chr14 | 62,950,016 | 62,950,271 | cds | Pithecia pithecia | Pithecia_pithecia | GCA_004026645.1 | 43,777 | Pitheciidae | mammals | 1 | zoonomia_cactus | tarseq_21 | 2,097,795 | 2,098,050 | - | 22,257,519 | 2,097,794 | 2,098,051 | 2 | 255 | AGATGGATTAAATACCTTTCTGAAGACAAAGTAGTTCATTTTAATCCTATCTGAGATTGTAGCCAGGAAAATTGTTAATAATAATAATTTTTAAATGAAAAAAATTAAAATACTTACAGCCAACCATCATCATAGCCACTGAAAACATCTTCTCCACATCTGTAGTAGGAGCTATGTTTCCAAATCCTATGGTTGTAAGGCTTGTCATGGTAAAGTAGAGAGAGGACACATACAGTGAATCCTTGCTGGGTCCTC | + |
win_chr9_000779839 | chr9 | 99,819,264 | 99,819,519 | ncrna_exon | Manis javanica | Manis_javanica | GCF_001685135.1 | 9,974 | Manidae | mammals | 1 | zoonomia_cactus | JSZB01007586.1 | 433,497 | 433,752 | + | 677,908 | 433,497 | 433,751 | 2 | 254 | AAGTAATATGTGGAAACTGCCAAGGCTTCTCTACACACCCACCCACCAGATACCATCGCAGCCGGCTAGGGGAGTCTCCCTCTTCTTGCCTGACAGCTTCACTTTCTTTGAGGTCTGGAGCTGGTGATCACACTGGCCCGTCATGGTACTTTCAGTTAACAAAGCAGTTACTCAACAGGGGAAAAAGCCACAAAGGAGTAGAGCAGCTGCTTCTGCACCCGTGATGCAAGTGCAGAATGAGCCCAGGGCCGCCAC | + |
win_chr2_001427659 | chr2 | 182,740,224 | 182,740,479 | cds | Mirounga angustirostris | Mirounga_angustirostris | GCA_004023865.1 | 9,716 | Phocidae | mammals | 1 | zoonomia_cactus | MirAng_flattened_line_699 | 31,608 | 31,863 | + | 237,562 | 31,617 | 31,853 | 12 | 225 | TCTATGGAAAAAAGACACAAATGGATGTTGATTAAAAGATTACAATATGATTCTCTTATTTTAGTTCCTTAATTCATTGGATGCTAAAGAAATATATTTGGAAATAATGCATAATCTTCCAGATTTTGAACTACTTTCGGCAAACACACTAGAGGTAATATTTCTGTTAATAATAATAAATGGTAGTAAATGTTGGTAACATTTCAAGTCTTAACATTTTAAAATCAGCATTTGTTTTATTCATCACTAGAAAGC | + |
win_chr11_000002266 | chr11 | 289,920 | 290,175 | cds | Ceratotherium simum | Ceratotherium_simum | GCF_000283155.1 | 9,807 | Rhinocerotidae | mammals | 1 | zoonomia_cactus | JH767824.1 | 113,437 | 113,692 | + | 5,982,466 | 113,445 | 113,683 | 15 | 214 | GGGCATCCCGAGTTAGCGGGCGCAGGGAGGGGACTGCTGTTGGTCCCCCCACTCACCTGGAACAATTGGGGGGGAGGATAGACGGTGGCTACCTGTGCTAGTGTCCAGGACAAAGCTCTCAGTCAGCTGCTCTCCTGTCCCTGCAGGGGCTTCCAGCCGGACGTTGAGGGGACTGGGCAGAATGGCCCGGTGCGTGTCCCCCCTAGCCCCATTGTACACGCCACTCACATGGAGTGTATCGTGATACACACGTGT | - |
win_chr7_000728279 | chr7 | 93,219,584 | 93,219,839 | tss_region_and_utr5 | Ctenomys sociabilis | Ctenomys_sociabilis | GCA_004027165.1 | 43,321 | Ctenomyidae | mammals | 1 | zoonomia_cactus | CteSoc_scaffold_29400 | 16,564 | 16,819 | + | 51,824 | 16,560 | 16,822 | 8 | 243 | TTGCATAGTTTTATTAGGACAGAATTTGACACAGACATTAATATAGTCATAATTATGAATGTTTTAATGGCTTCATTGGACTTTAGACATGCTTTTCTGGTTCCTTTTCCCATTATTCTTTAACAGTCATAGTGAACAACTTCTGCTTTTCCTTTTCTTCTTGCACATAGGGAAGTCATGAAATCTGCATAGTCTTTGGGTGGAGTTTTTAAAATGCAGGCTTCAGAGGCAAATATTTACTTTTACCTGTAACTA | - |
win_chr8_000501865 | chr8 | 64,238,592 | 64,238,847 | background | Heterohyrax brucei | Heterohyrax_brucei | GCA_004026845.1 | 77,598 | Procaviidae | mammals | 1 | zoonomia_cactus | HetBruBak_scaffold_109454 | 4,013 | 4,268 | - | 10,103 | 4,012 | 4,268 | 4 | 251 | AATATTTACAAAATGGAAATGTAACCTTAGCACTAAGGAGAACAGGAAATTATAAAATGGAATTGAAAGGAGTCTAGCAAATGAAACCAGCTCTCGATTTGTCTAAAATTAATTTCTCTTTCAGTATTCTAAGAACCTGTTCATTAATACAACCAGTGAGCAAACAACAAACAAATCTAAACCCACTTCAAGTAAAGCAGAAGAAAACTTGTCATCTTAAGTATCTCGATTATTTAGAAAAGTTGGAATTTTATT | - |
win_chr4_001130616 | chr4 | 144,718,720 | 144,718,975 | cds | Tupaia tana | Tupaia_tana | GCA_004365275.1 | 70,687 | Tupaiidae | mammals | 1 | zoonomia_cactus | TupTan_flattened_line_290394 | 1,327 | 1,582 | + | 4,410 | 1,374 | 1,535 | 7 | 160 | GCACCAAGAGTTGGAGAGTTAGAGACTTAGCAGCAGGGGTCACTCATTGTTTGGCAATAAGTAAAGTCGTCTAAGTAAGTTAACTTACTGTTCCTTTTCTCTTCAACAGGTGAAGTTTACATATTATCAAGCAGCAAAAGTATGACTCAGACTCACAATGGAAAACTCTACAAAATTGTAGATCCCAAAAGGTGAGATTGTTTAATCCCTTTCAGTCAAGCACTAATTTTCTTCAAGTTGTTTTTGTTCTTTCCA | + |
win_chr2_001826314 | chr2 | 233,768,064 | 233,768,319 | cds | Macroglossus sobrinus | Macroglossus_sobrinus | GCA_004027375.1 | 326,083 | Pteropodidae | mammals | 1 | zoonomia_cactus | MacSob_scaffold_6258 | 133,202 | 133,457 | + | 151,798 | 133,215 | 133,443 | 14 | 209 | TGTCCATCTGATCACCAAACAGAGGCATCATCACCATCGGGACGCCGTTGCATATTCCCTCATAAATGCCGTGGGAGCCCGAATGTGTGATAAAGGCGCGAGTCTTCGGGTGAGCTGGGGAGAAAAAAGGGAGGGGTGCCGGTGGTCAAGTCCTTGCGCTTCACATTCTGGCAGCATCTAGACTCTGAAAGCACTCTCAGAGCTTGGTGCTCTACACGTGTGGGTTGAGATGCCCCGCTGGATAAAAAGCAACGT | - |
win_chr10_000783171 | chr10 | 100,245,760 | 100,246,015 | cds | Microcebus murinus | Microcebus_murinus | GCA_000165445.3 | 30,608 | Cheirogaleidae | mammals | 1 | zoonomia_cactus | CM007675.1 | 50,069,150 | 50,069,405 | + | 77,693,121 | 50,069,150 | 50,069,405 | 1 | 255 | TAGAAATGACGTGGCGGGAATGTTCCCTAGTATGTGAATGGTTGGCTACTTGTCTAAAGGTTAGGTGAATAATATTTACCCTTCTGCCTTTGGCCATTCCAGGAAGAATCAGCCTGtcagtttttctttgatttaaatgaaaagcaaggaaggaagcGTCCATCCACCGGCAGAGATAGCAAATCTTCTCCACACCCAAAGCAGCCTCGCAAACCTCGTAAGTATCTTGGTTCTAGAGGTCTCCTGTGTGAGCAG | - |
win_chr2_000880540 | chr2 | 112,708,992 | 112,709,247 | ccre_non_promoter | Lycaon pictus | Lycaon_pictus | GCA_001887905.1 | 9,622 | Canidae | mammals | 1 | zoonomia_cactus | CM007582.1 | 36,909,602 | 36,909,857 | + | 64,259,867 | 36,909,606 | 36,909,853 | 15 | 238 | TTCACAGATTTCTCAAATCCAGACTAAGCAGCCATAGCAGCGGCCCAGGAGGCTCAGCGCTCCAGCCTGAGATCCGTCTCAGGGGTTCTGGGCGGCGCAAGCTGAGCTCGGTGCAAGGATTCTAGGGCAGCAAGAGACTGACCTAATTAAACACCTGGCCTTATTCTTAGACAAGGAGCCCCAGTTAGGGCCCCTGGACAGCCACCACGCAAAGGCACAGCCCTAGAGGCAACTggaataattcttattttaaat | - |
win_chr5_000854906 | chr5 | 109,427,840 | 109,428,095 | ccre_non_promoter | Nannospalax galili | Nannospalax_galili | GCF_000622305.1 | 1,026,970 | Spalacidae | mammals | 1 | zoonomia_cactus | KL204965.1 | 3,160,823 | 3,161,078 | - | 4,047,778 | 3,160,821 | 3,161,080 | 6 | 253 | GCCAGcaaaagaagtagaaagaagaGGAGCTGTTACAATCCCAGTGAGAGGATGATGTTTCAGATGCAAGGGGAAAGTGTTTCTAGGCAATGATGGTGATACACTCCTAGCACTTGTTAATAGTTCACATTCCTTTTCAAATTCACAGCTTGGATTTCACATTGTTTCCAGGATTCCTGAGGAGTAGTTCTGACCAGgaattctttttatctttctggTGTGTATTTAAGTTGTAAATATTTTTGACCTTCAAAT | + |
win_chr20_000318066 | chr20 | 40,712,320 | 40,712,575 | background | Galeopterus variegatus | Galeopterus_variegatus | GCA_004027255.1 | 482,537 | Cynocephalidae | mammals | 1 | zoonomia_cactus | GalVar_scaffold_470 | 84,697 | 84,952 | - | 297,326 | 84,697 | 84,952 | 1 | 255 | GTACTTGATGAAGATACCCTGCCTGGAAATAATTGCATTCCGACCCCTGAGTCCCACTTAAAAGTCTTTGGGACTGATCGAGATAAATCCCATCAGGCTTTTGTTTCCACTCAGAGTGCCCCCATCATTTATTAGACGAATTAAAGTATCAATTTCTGTTTAAACATTAACAGGGTGATGCCAAATATTAGTCAGTTCCTAATAATTTTGAGGGATTAAAAAGATAATAAAAGTAATAGTCCATTACATTACCTA | + |
win_chr2_001578403 | chr2 | 202,035,456 | 202,035,711 | cds | Mungos mungo | Mungos_mungo | GCA_004023785.1 | 210,652 | Herpestidae | mammals | 1 | zoonomia_cactus | MunMun_flattened_line_9051 | 138,836 | 139,091 | - | 162,575 | 138,836 | 139,091 | 1 | 255 | ACCCACCAGATGGAACTGGCCATGCCGAAAAAGTACAGCACCATGAAGAGGATAGTGCAACCCTCCTTCTTGGTGCCCTGCGCCACCGTGCGGTAGCCGTCGTCTGAGAAGCGCTCCACGCACACCGCGCGGTCCTCCAGCAGGAAACCGGCCACGTGCGCCACGGCCACCATGAAGTAGCAACCCGACAGAAAGATGATGGGCCGCTCGGGATAGCTGAAGCGCCGCATGTCCACTAAATAGGTGAGCACGGTG | - |
win_chr2_001154041 | chr2 | 147,717,120 | 147,717,375 | ccre_non_promoter | Ursus maritimus | Ursus_maritimus | GCF_000687225.1 | 29,073 | Ursidae | mammals | 1 | zoonomia_cactus | KK498623.1 | 14,447,454 | 14,447,709 | + | 14,983,989 | 14,447,453 | 14,447,709 | 7 | 247 | TAGGATTCTGACACTTTCTCAAAATGACAAGCGTGTTGACATAAGGCAATAAACACAACTGACCAGTATTTTCTAAGAAGTTTTACTCGTTAATGCCTTGAAATAGCAAACACTatttaaaagcctttaaaaataactcataCTGCAATATTTACTTGTTCCTGTTGAGAACGGAGAACAAAAATAGCCACTCATGGAGACTTGCATCAGAATAACGTGCTGCGTTTTTTCAATAAAATCACAACCAGTTCTCTC | + |
win_chr11_000716066 | chr11 | 91,656,320 | 91,656,575 | background | Chrysochloris asiatica | Chrysochloris_asiatica | GCA_004027935.1 | 185,453 | Chrysochloridae | mammals | 1 | zoonomia_cactus | ChrAsi_scaffold_93642 | 4,357 | 4,612 | + | 15,652 | 4,357 | 4,612 | 2 | 254 | CTTCGCATCCTTTGTTAATAACTGCTTCCCTATAATCAATGGATTTACTCACTTGCTAATAAATGTTCCTTTACTTACTTAATTGTTGATTTTTATCTTTATTTAAAAGGTAACTTAGGAAAAATGGTTTCCATGACTCTTTAAATTTGGACACTTGCTAAAACATAGCATTTCCTTCATCTAATAAGCATTGTCTAGTGCTTAGTTTGTTTCTAGCATGATGCTAAATGCTATAAAGAAAATAAGATAGCCTTA | + |
win_chr2_001570486 | chr2 | 201,022,080 | 201,022,335 | ccre_non_promoter | Odobenus rosmarus | Odobenus_rosmarus | GCF_000321225.1 | 9,707 | Odobenidae | mammals | 1 | zoonomia_cactus | KB228894.1 | 1,865,830 | 1,866,085 | - | 8,945,565 | 1,865,829 | 1,866,086 | 6 | 250 | CCGGATGAATAAACTTAGAAAAAGAGTTTCCTGTTATTCAGCTTTGCGATAGAAAGGGGAAAATGCAGCTATTGTATCTATATGTTAATTTATGCAAAATACACACATTATCTTTCCATTAACACAATAGTATGACATACAGTTTTATGACCACTGGATTCGTGtatgctttaaaatgaaaatgaaaggaacacACAGGAAAGTAGCTTCTTATCTTCCCAGATACAGCCTCCAAGAGTGCCTCTGCTGTGTACT | - |
win_chr6_001068956 | chr6 | 136,826,240 | 136,826,495 | cds | Loxodonta africana | Loxodonta_africana | GCF_030014295.1 | 9,785 | Elephantidae | mammals | 1 | zoonomia_cactus | GL010027.1 | 22,912,173 | 22,912,428 | - | 129,759,341 | 22,912,160 | 22,912,440 | 12 | 243 | ATTCCCTTCCTACCTCCTGGCTGTGTTCTTTGTAGACTTGCAGCGGCCCTGTGGCTTTGGCTGTGTCCCAGAGCTGCAGCGAGCCATCACCACTGCAGGTGACGAGGACATGTTCGTTGTTCTCACTCCAGGTTACATCAAACAAACCATCACTCCAGTCAAAGCTACaccagggaaattaaaaaaatatatatatatacacacacacacatatatatctccCTACTTACACAGACAGCTGACAAAAAGagtaat | - |
win_chr12_000002509 | chr12 | 321,024 | 321,279 | cds | Orientallactaga bullata | Allactaga_bullata | GCA_004027895.1 | 1,041,416 | Dipodidae | mammals | 1 | zoonomia_cactus | AllBul_scaffold_34115 | 19,751 | 20,006 | + | 43,107 | 19,768 | 19,988 | 6 | 219 | GCCTGGCTGATGACACACGGAAGACTAAAAAGTTGTTGGACAAAGGCCTTCAATTCTTCTACTGTCAGTTTGGTCCGAGTCCTCCCACTATCTGAGCTCTGCCTGATGTGAAACAATATTAAGACACAGTAAGAAAAATTTGTCATTCTGGTATCAAATGTGGCTCCTAGTCTTTTCAGAATTCAACCTTAAGCAATCCTAGAACTTTAGTGTCGAGGGATTCCACCACAGTTAAGAAACTCAAGATTTAATTCT | + |
win_chr9_000289042 | chr9 | 36,997,248 | 36,997,503 | ccre_non_promoter | Phocoena phocoena | Phocoena_phocoena | GCA_004363495.1 | 9,742 | Phocoenidae | mammals | 1 | zoonomia_cactus | PhoPho_flattened_line_1338 | 280,714 | 280,969 | + | 331,380 | 280,721 | 280,962 | 12 | 228 | TGCCCAGAAATTCCACCTGCAATGTACCCTCCACTGCCCCCAAAGAAGCTTCCACACGGGTGCTGGATTGGCCAGCCTTCTGAGCTAGTGAAAGGCATTCGCACTCGGCTGACCTCGGTGTGTTGAGGGCCTTTCAAACTGGGGGGATGAAGGGAGGGGGAGGTCAAGGGGACCTGAATGGGGGCCCTGGAGACGGCGGAAGGAGGCCCCACCAGAGATCAAAGGCCCAAAAAGGAACAGAGGGCCTGGGGCTGC | + |
win_chr15_000313323 | chr15 | 40,105,216 | 40,105,471 | ccre_non_promoter | Papio anubis | Papio_anubis | GCA_000264685.2 | 9,555 | Cercopithecidae | mammals | 1 | zoonomia_cactus | CM001497.2 | 14,694,061 | 14,694,316 | + | 162,899,863 | 14,694,060 | 14,694,316 | 2 | 255 | AAGGCTGGGGGATCTGTGACCGGCTGTTGACAATGAAGGGGGAAAACCCAGCCGGTTCTGGGAGGGAGGGTTCCCAAAGGCAGAAGGTGGCCCCCAGTTGTCACTTGGGACTTTCTGTGCGTGAAAGGGAAACTGGAGAAAGAGGTTGGGCCGGCCTGGGCCCAATGCCAGCAGAGGGGATGCTTCCAAGGCTAAGACAAGACCCCTTCATTTGTGGGCTTAAATAGTTTGTTTTGTGAGAAATATGCCCTCCTC | - |
win_chr9_000011858 | chr9 | 1,517,696 | 1,517,951 | background | Myrmecophaga tridactyla | Myrmecophaga_tridactyla | GCA_004026745.1 | 71,006 | Myrmecophagidae | mammals | 1 | zoonomia_cactus | MyrTri_scaffold_12244 | 15,164 | 15,419 | - | 89,885 | 15,165 | 15,418 | 7 | 251 | TTCTCCCAATATTAAGACCTTGCTGGTAAAGGTTGATTGTTCTTGATACTCATTTGGGCCAGCTTTATTAGTTGCATGCCAAAAGCAAAGAAACCAAATCTTTCCTTTATTCTATTACCTTATGATAAAATGCCTAGACTGTGCAGCCTCCTTTGGGCACTTTATAAATTTTATTGGTGCCTGAGGGATTGAATTGCAAATAAAGCATTCCACTTATCTTGTAAGAAATTATTCTGATCTCATAACAGTTCTTAG | + |
win_chr3_001435022 | chr3 | 183,682,688 | 183,682,943 | utr3 | Nycticebus coucang | Nycticebus_coucang | GCA_004027815.1 | 9,470 | Lorisidae | mammals | 1 | zoonomia_cactus | k141_6298323 | 6,889 | 7,144 | + | 15,994 | 6,885 | 7,148 | 11 | 233 | TGTATCTTTACTATCAAATACCCTTTTTGAAACTCAGGAAAGACAAAGGTTCAATTACATCACTTTTGTCAATATGCAAACCAGGTATATGTGTTTTGGGGTTTTTTTTCCCGATTGTCTGGATATGGCGATAGATTATTTTTTTTAATTGCTGTGAGAACCCATATATGAAAAGAGAGGGGTTGAATTATTTGTGTGTGCCTTTTATGTCTTGAGATTTATATGTGGGAAAGACAACATCTACTTCAAACTCTG | + |
win_chr14_000584229 | chr14 | 74,781,184 | 74,781,439 | cds | Otolemur garnettii | Otolemur_garnettii | GCF_000181295.1 | 30,611 | Galagidae | mammals | 1 | zoonomia_cactus | GL873539.1 | 1,373,386 | 1,373,641 | + | 27,606,538 | 1,373,386 | 1,373,640 | 3 | 253 | AGTTGTTCCTCCCACAGCTGAAACTCTCGCTCCCATTCTTGGTAAAGATGTTGAAACTGCTGCTGCTGCATCTCATAATGCCGCAGCTGCATGTCTACAGACATGGTCTACAAATAAAGGCAAAAAGtgatttcaaaacatttaaataagagAATTAATCATaggttaaaatattaatgaatcaaAGCTATGTGAAGCCTCAGGAAATGAGAACACTAAAGACTCTGGAAAGCTAAGGAGAAGCTTGTCCAACTC | - |
win_chr7_000972048 | chr7 | 124,422,016 | 124,422,271 | ccre_non_promoter | Odocoileus virginianus | Odocoileus_virginianus | GCA_002102435.1 | 9,874 | Cervidae | mammals | 1 | zoonomia_cactus | KZ100426.1 | 545,708 | 545,963 | - | 1,890,851 | 545,705 | 545,966 | 4 | 246 | TTTGGGATGGTGAGAATtgtcatactcatctatttcccagtgtactcagcacagtgccctgtttgtaggtgcttaagaaatatttgttgcactgagttgaAGTATAGTGAGAAGAGGCATAAGCAGGCAAAGTGAATATCTTGCCAAATCCCTTAATTCCCCAAATCCGCATACTGCCAACAACAAACTGTAAATTAGAACTGCCACAGATATGTTTGAACTTCTGTTTAAATTCCTCCCTAAGTTAGTGCTTCT | + |
win_chr9_000116090 | chr9 | 14,859,392 | 14,859,647 | cds | Ursus maritimus | Ursus_maritimus | GCF_000687225.1 | 29,073 | Ursidae | mammals | 1 | zoonomia_cactus | KK498587.1 | 5,317,325 | 5,317,580 | - | 7,798,381 | 5,317,336 | 5,317,569 | 3 | 233 | aggagaagaaaggaaatgaacacagATTTGAAGTGGTGTATACAACAAAATCCAAACTCTACCCCATAGGCTCATTTTGTAAAGGTCAATCTTTAGATACCAGAAGTACCTGAGCACTAGTAAACATTGCCTTCGCTCTGTTCTCTTCACAGATTTACTGAGACAGATACCTTCATGGAAACCTTTATCCTGCGGGTCTATCTCCTGGAACCAGACTGTAACATCATCCGTAGGAGTAACAATGTCCTGGAGGTG | - |
win_chr15_000288666 | chr15 | 36,949,120 | 36,949,375 | ccre_non_promoter | Cryptoprocta ferox | Cryptoprocta_ferox | GCA_004023885.1 | 94,188 | Eupleridae | mammals | 1 | zoonomia_cactus | CryFer_flattened_line_396 | 499,208 | 499,463 | + | 645,496 | 499,207 | 499,463 | 2 | 254 | CATTAACAAAGCTTTTAGGTTTATCAGGCTCGCTGCCTGATGAGCTACCCGAGGGTCAATTGATTTTGTGGTTCTGTGATTCATTTTTTTCTCATTTTTCTAGGATCACAATGAGAGACATGCTTGGAGAATTAGCCAGTTTGTCTGCCTTATCTGTCAGGCAATTTTTTTTTTTTCCCAGGGAAGTCAAGCTACTTAAATTGGCCACAGGAACTGCCGTTATCTGACTTTAATGCACCCTATAGTGTGGATAGC | - |
win_chr1_001726713 | chr1 | 221,019,136 | 221,019,391 | background | Geospiza fortis | geoFor1 | GeoFor_1.0/geoFor1 | 48,883 | Thraupidae | birds | 2 | ucsc_multiz100way | JH739889 | 518,545 | 518,800 | - | 22,321,128 | 518,563 | 518,782 | 8 | 217 | TTTAAATCACACTGTATAATATACTTTGTGGCAATGCGTGATGgccaaaatatataaaatatgatgAAGTTAAGAAGTTGCAGCTGAACTAACAATATATTCTTCTGGAAGGAGACATTGAATAAATTGGGTTTTGATAGCAAATTAAAGTTCTTCTAAGAGCTTTGCTGCATTCCTCTGCATTCTTCAGACATAACCTTTGAAACAACTATTTCCAATTGTAAATATTCCTCTAAACTTCCATGGTATTAAGAA | - |
win_chr3_000558924 | chr3 | 71,542,144 | 71,542,399 | background | Otolemur garnettii | Otolemur_garnettii | GCF_000181295.1 | 30,611 | Galagidae | mammals | 1 | zoonomia_cactus | GL873534.1 | 15,606,904 | 15,607,159 | - | 30,473,821 | 15,606,903 | 15,607,159 | 5 | 253 | TGAACATTTTCCTCCATGAAAAAACAACACCCTTAATGCTTTTCATATGGCACATAAATTTTACAATACCTGCAGGAATATTTTCATTGGTTAAACCAACACCATAGGTCTTTTTAGCTCTTAAGCATATTACGATTCTTGCCTTTTtatggcatttttgttgttgtttgcaccCAATGTAATAAGCTTTCGAGAACAAGAAACcaaccacaataaaaagaaaaaaaaagactaccctTTGTAACTTGCAACTTT | + |
win_chr9_000254241 | chr9 | 32,542,720 | 32,542,975 | cds | Oryzias latipes | oryLat2 | MEDAKA1/oryLat2 | 8,090 | Adrianichthyidae | ray-finned_fish | 6 | ucsc_multiz100way | chr1 | 19,636,387 | 19,636,642 | - | 39,973,033 | 19,636,434 | 19,636,595 | 11 | 144 | CTCTGATTCTGATGAGTCTTTCGGTGAAGACGCCAAAGCTGCGGCTCTCCAACCTAAACACATTCGTTTCCCCAGTTGTAGTCCAGCAGCTTCACTGAGGAGTGAATGCAGCGGCTCCAGACGAACAGAAAACCAGAGAAACTATCAATATCCCAAGTCAAACGAGGAGTGCGGCTCATCGAAATCAAGCAGATGTAAAACATCCAAAGAGTCTCACAATAAAGAGACAGACCGAAGACACTGCAGTGAGAAGCA | - |
win_chr15_000526623 | chr15 | 67,407,616 | 67,407,871 | ncrna_exon | Panthera onca | Panthera_onca | GCA_004023805.1 | 9,690 | Felidae | mammals | 1 | zoonomia_cactus | PanOnc_flattened_line_13520 | 58,039 | 58,294 | - | 107,458 | 58,039 | 58,294 | 1 | 255 | ATCAGTACATAAAGCTATGGGCCTGCAGTGTTAATTTTTCATATGCTTACAAAGTACCCTTTGATTTTCTGTCACACGTTAATTACAGCGTTTTGCCATTAAATAGGAAGCTTTGTGTAAACTAATTACTAGGTAATCATTGTCTACTGCAAGCGTGCTGTTTGTACCTTTTATTTTATTCTAAAAATGCACAGATCTcacagtctggaaacactctaccttccagccattagctctcactaattcatagcaTTA | + |
win_chr3_000373850 | chr3 | 47,852,672 | 47,852,927 | cds | Muscardinus avellanarius | Muscardinus_avellanarius | GCA_004027005.1 | 39,082 | Gliridae | mammals | 1 | zoonomia_cactus | MusAve_scaffold_23308 | 47,507 | 47,762 | + | 60,266 | 47,529 | 47,739 | 16 | 193 | ACAAGAGCAGGCCAGACACTGTGCCTAAGGTAAGGGAAAACAGATGTGGGGCAAGAGAAGAGGGGAGGGACTGCCCAGCACCCAGTGCTCATGGGCCTAGTAGACAGCCCTGGGAAGGGGGCCAAGGGCCCGGGAACCCAAGTTTGGGCCACCCGGGAAGTGGGGTGGCCGGGAGACAATGTCGGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACAT | + |
win_chr9_000884582 | chr9 | 113,226,368 | 113,226,623 | ccre_non_promoter | Hydrochoerus hydrochaeris | Hydrochoerus_hydrochaeris | GCA_004027455.1 | 10,149 | Hydrochaeridae | mammals | 1 | zoonomia_cactus | HydHyd_scaffold_5924 | 172,872 | 173,127 | - | 237,016 | 172,873 | 173,126 | 4 | 252 | CTTGTGACTTAATTATGAAAAGTCATCAGAAGTCTGATAATTAATACATTACAACCGGCAGTTTATGCCAAAAGCAATCTTATAGTAGGCACTGAGAAGGAAGTGCTTTTGAAGTTGTATTGCTTTGAGTAATATCATTTCATGATTTAGATAACATCCCCAAGCGGGGTGGGGGGCATCCTTAGGAATGCAAAACCCTGCAGAGAAGGAAAAGGTTGAAAAGGATCCACCCTACCACTTTTCCTATACACAAAG | + |
win_chr3_001350420 | chr3 | 172,853,632 | 172,853,887 | background | Tragulus javanicus | Tragulus_javanicus | GCA_004024965.1 | 9,849 | Tragulidae | mammals | 1 | zoonomia_cactus | TraJav_scaffold_10011 | 32,032 | 32,287 | - | 116,347 | 32,032 | 32,286 | 3 | 249 | GTTCTTTAAAAATAGTAAAAAATTTCCACAACTGCTGACCATAGGAAAGGCATTTCACTTCATCAGTCTCATAAATATTCAGCTATTGTACCTTTCCATAAACAGCCAGAGATTTATTCATTATATTGAATTGCAGTCTCAACCTTCCTTTCTGCTCCTTTGTGAAGAGAGAGATAATATTAAGGCAGTTTTTACAACGCCTCAGCCTTGAGGGAATATAAATATAAGCATAATTGATTTTCTGAACTTGCTTTC | + |
win_chr9_001003863 | chr9 | 128,494,336 | 128,494,591 | ccre_non_promoter | Mus musculus | Mus_musculus | GCF_000001635.26 | 10,090 | Muridae | mammals | 1 | zoonomia_cactus | chr2 | 29,922,091 | 29,922,346 | + | 182,113,224 | 29,922,142 | 29,922,294 | 8 | 136 | GCCAAGATCAGCCTGCTCTGCCTCCGGGGGAGCAGCCCGACTCCTGCCAGTGGGACTGGGTCAGCCATGCTGTGTTCTCAGTTGGGATCTTACCAATGCTGGGCTTCTTTTCCTGCCTCAGGCCCGTCGGCAGTTCCAGTCACAGCTGGCTGACCTACAACAGCTGCCTGACATCCTCAAGATCACGGAGGCCAAGCTGGCTGAGTGCCAAGACCAGCTGCAGGGCTACGAGAGGAAGAACATCGACCTCACAGC | + |
win_chr9_000865257 | chr9 | 110,752,768 | 110,753,023 | ccre_non_promoter | Eschrichtius robustus | Eschrichtius_robustus | GCA_004363415.1 | 9,764 | Eschrichtiidae | mammals | 1 | zoonomia_cactus | EscRob_flattened_line_6442 | 47,628 | 47,883 | + | 157,234 | 47,628 | 47,883 | 5 | 253 | AGAGAAGGCATCTTGCCAATAACCCAGCATCCTGCTGAGTTTAAATTGCAACTTGAGCCTTTTGAGGTTGTGACTGGAGGGGAAATGGAACTTCCTGGTTCATAGGGAGAGGTTCCAAAAGTTTTTCTGGCTCCTTTTGATGACTAACAGCAAATGTAAATGAGTCAGAAAGAAGTATATCACATTTCTCAAATAATACATATGAATCTGGGCATACACATGGAAGAGTTTTGGGAAAATGAAGGCTTATCTTTA | - |
win_chr8_000619037 | chr8 | 79,236,608 | 79,236,863 | ccre_non_promoter | Trichechus manatus | Trichechus_manatus | GCF_000243295.1 | 9,778 | Trichechidae | mammals | 1 | zoonomia_cactus | JH594758.1 | 5,416,727 | 5,416,982 | - | 7,019,602 | 5,416,646 | 5,417,062 | 7 | 251 | tccaccaggcactgcttgaaaactctatggggcagttctactctgtcctatagggtcgctatgagttggtttttttttttttttctctgataatATGATGGAAATTTATTTGCCCTAATTTAAAATCTAATGAAATTTCTTGCTCTTGCCATTTGCTTTTGACTTCAATGGGATGTTTCTGACTAATAAAAACATGTACAAGAGGATTTTTAACTATCATATAAAAAAGTTCTTATGACCGTAAGCTGTTGCTGC | - |
win_chr10_000688007 | chr10 | 88,064,768 | 88,065,023 | ccre_non_promoter | Orycteropus afer | Orycteropus_afer | GCA_004365145.1 | 9,818 | Orycteropodidae | mammals | 1 | zoonomia_cactus | OryAfe_flattened_line_54128 | 27,192 | 27,447 | + | 36,441 | 27,189 | 27,450 | 3 | 254 | CACAGGTTTGAAATTGAGAAACCTAGAGATGACCACAGCCCTAGACCACTGTGTGCAAAAATGGGAAATGTCATTCAACAGGTCCTCCCCTACGTTTAACCAGAATCATCGGTCTGTAGATTCCGGAACTGAGTGACTTGACCACTTTGCACGTAAACCACATGCATTGGTCCAAAGGAGCCCAGTGAGTAACAATTCAATTTAGAGTTCACTGAACCCTCTGGTTTGGGAAGGAAATTGCTGGTAATCAATTGC | - |
win_chr11_000960317 | chr11 | 122,920,448 | 122,920,703 | ccre_non_promoter | Zalophus californianus | Zalophus_californianus | GCA_004024565.1 | 9,704 | Otariidae | mammals | 1 | zoonomia_cactus | ZalCal_flattened_line_4973 | 133,429 | 133,684 | + | 205,659 | 133,429 | 133,683 | 7 | 239 | AAAACTTGCAGTGATTGCAGAACTTAAGGATAATATGCTTTCAAAACATGTTTCAGTGTGTGTCTGTGCAGAGACACTAATTCACATATAGCTCTTGGTGTAAAGCCTCAACTTTTTTTGTGTGGTGCCGATTCTCTAGGAACCTGACGAGTTTCTTTGAGAAAGAAGTAGCAGCCCAATCTAGCTCAGCTGTACTCAATCTGAGTTGCTTTCCTTCCTACAAACCCTCACTTCAAAGCAAGGAACATAATGTAC | + |
win_chr14_000282977 | chr14 | 36,220,928 | 36,221,183 | ccre_non_promoter | Hippopotamus amphibius | Hippopotamus_amphibius | GCA_004027065.1 | 9,833 | Hippopotamidae | mammals | 1 | zoonomia_cactus | HipAmp_scaffold_4440 | 59,128 | 59,383 | + | 179,447 | 59,129 | 59,381 | 5 | 246 | TAGTTAAAAACTATATTTACTCTAAATTGCAAAATGGTAGGTATTGTATGTGATGTTTAAGTTGCAGTGATTGTTCTAGTAATAAATGTAATATTCAGCAGCATTTTTCATAGATTACTCATTAGTGCCATTTTGCCTCTTTATAATAATGCACACTTTCCTTTAGAAAGAGCTTGGTTATTTCTTTGGTTGGGCCTATTTGCTCCTTTTTTATGTGAGATTTTTCAATACTATGAAATGATGCAGAGCAAAAAA | + |
win_chr1_000253080 | chr1 | 32,394,112 | 32,394,367 | tss_region_and_utr5 | Scalopus aquaticus | Scalopus_aquaticus | GCA_004024925.1 | 71,119 | Talpidae | mammals | 1 | zoonomia_cactus | ScaAqu_scaffold_3983 | 126,949 | 127,204 | - | 161,362 | 126,945 | 127,208 | 5 | 236 | CTCCGCCACCATCCCACGTCCTCCCTGTGGAAGACAGACACATCTGGAAGCCCCGCGGTGCGACCCCCGCCGGCCCAAAGATGGGGTCCATCAGATCTGTTTCCCCGTCAGATGTGGCCGCGCGCCGAGGTTTAGCAGATCACTTCCCCACCACCTCACACTGCGACTCCACTCCCCCTTTCCAACTCCGTCCACGCCCACGCTGGCCTCGCGTTCCCCATGGAGACCCTGGCCCAGCACCCCAACCCTGGGAGA | + |
win_chr16_000403776 | chr16 | 51,683,200 | 51,683,455 | background | Mesoplodon bidens | Mesoplodon_bidens | GCA_004027085.1 | 48,745 | Ziphiidae | mammals | 1 | zoonomia_cactus | MesBid_scaffold_21333 | 23,063 | 23,318 | + | 53,666 | 23,065 | 23,316 | 2 | 251 | AAAAATGTTTCTGTGCAAACACTTGATTTTATAACGCACTTTGCAGCTTTCTCCTATAATTAGTTGTTAAATCTATATTTGACTTTGTCTAAATGGTTGCAGTGCAGGGCTGATTTTCTTGCCTCTCACTTTGGCTATTTCATCTTACCCCTGCCCATGTATCTGTCTGCATGGAGGTATGGCATCTTGGTTAGTTTTTAGAAAGAAGGCAAAAACCAGGAAACATGCCAGAAGTCAGGGTCCAGTTGCACCCAG | - |
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marin-dna/vertebrate-v1-all
Human-anchored 255 bp vertebrate sequences from the Zoonomia 447-mammal Cactus alignment and UCSC hg38 MultiZ 100-way alignment. This
draft covers the all region cohort with all species
scope and preserves source FASTA/2bit letter case.
Anchor eligibility uses the pipeline's pinned phyloP conservation filter. Sequence case is independent of that filter: lowercase bases preserve source repeat masking, uppercase bases preserve source non-repeat-masked sequence, and conservation scores never rewrite emitted characters or case.
Produced by the commit-pinned vertebrate projection pipeline.
Splits
train: 240,128,926 rows; no chromosome-18 source anchors.validation: 16,384 original-orientation chromosome-18 rows (4,194,304 tokens including BOS).
The selected target manifest contains 135 family-deduplicated projection targets; human reference rows are added separately once per anchor.
| Projection backend | Clade | Selected species |
|---|---|---|
| ucsc_multiz100way | amphibians | 1 |
| ucsc_multiz100way | birds | 11 |
| ucsc_multiz100way | jawless_vertebrates | 1 |
| ucsc_multiz100way | lobe-finned_fish | 1 |
| ucsc_multiz100way | ray-finned_fish | 9 |
| ucsc_multiz100way | reptiles | 5 |
| zoonomia_cactus | mammals | 107 |
Schema
query_name:Stringsource_chrom:Stringsource_start:Int64source_end:Int64region_label:Stringspecies:Stringalignment_name:Stringassembly:Stringtaxonomy_id:Int64family:Stringclade:Stringphylogenetic_rank:Int64alignment_source:Stringt_chrom:Stringt_start:Int64t_end:Int64t_strand:Stringt_src_size:Int64pre_resize_t_start:Int64pre_resize_t_end:Int64fragment_count:Int64aligned_bases:Int64sequence:Stringaugmentation:String
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