import _surface
import chimera
try:
  import chimera.runCommand
except:
  pass
from VolumePath import markerset as ms
try:
  from VolumePath import Marker_Set, Link
  new_marker_set=Marker_Set
except:
  from VolumePath import volume_path_dialog
  d= volume_path_dialog(True)
  new_marker_set= d.new_marker_set
marker_sets={}
surf_sets={}
if "Cog2_GFPN" not in marker_sets:
  s=new_marker_set('Cog2_GFPN')
  marker_sets["Cog2_GFPN"]=s
s= marker_sets["Cog2_GFPN"]
mark=s.place_marker((455.091, 548.131, 441.132), (0.89, 0.1, 0.1), 18.4716)
if "Cog2_0" not in marker_sets:
  s=new_marker_set('Cog2_0')
  marker_sets["Cog2_0"]=s
s= marker_sets["Cog2_0"]
mark=s.place_marker((523.214, 547.7, 441.398), (0.89, 0.1, 0.1), 17.1475)
if "Cog2_1" not in marker_sets:
  s=new_marker_set('Cog2_1')
  marker_sets["Cog2_1"]=s
s= marker_sets["Cog2_1"]
mark=s.place_marker((604.168, 545.527, 428.693), (0.89, 0.1, 0.1), 17.1475)
if "Cog2_GFPC" not in marker_sets:
  s=new_marker_set('Cog2_GFPC')
  marker_sets["Cog2_GFPC"]=s
s= marker_sets["Cog2_GFPC"]
mark=s.place_marker((518.447, 575.68, 322.142), (0.89, 0.1, 0.1), 18.4716)
if "Cog2_Anch" not in marker_sets:
  s=new_marker_set('Cog2_Anch')
  marker_sets["Cog2_Anch"]=s
s= marker_sets["Cog2_Anch"]
mark=s.place_marker((797.322, 526.929, 442.213), (0.89, 0.1, 0.1), 18.4716)
if "Cog3_GFPN" not in marker_sets:
  s=new_marker_set('Cog3_GFPN')
  marker_sets["Cog3_GFPN"]=s
s= marker_sets["Cog3_GFPN"]
mark=s.place_marker((500.094, 537.392, 437.867), (1, 1, 0), 18.4716)
if "Cog3_0" not in marker_sets:
  s=new_marker_set('Cog3_0')
  marker_sets["Cog3_0"]=s
s= marker_sets["Cog3_0"]
mark=s.place_marker((499.049, 536.799, 437.736), (1, 1, 0.2), 17.1475)
if "Cog3_1" not in marker_sets:
  s=new_marker_set('Cog3_1')
  marker_sets["Cog3_1"]=s
s= marker_sets["Cog3_1"]
mark=s.place_marker((507.795, 510.364, 433.323), (1, 1, 0.2), 17.1475)
if "Cog3_2" not in marker_sets:
  s=new_marker_set('Cog3_2')
  marker_sets["Cog3_2"]=s
s= marker_sets["Cog3_2"]
mark=s.place_marker((506.351, 483.306, 425.224), (1, 1, 0.2), 17.1475)
if "Cog3_3" not in marker_sets:
  s=new_marker_set('Cog3_3')
  marker_sets["Cog3_3"]=s
s= marker_sets["Cog3_3"]
mark=s.place_marker((512.173, 459.896, 410.9), (1, 1, 0.2), 17.1475)
if "Cog3_4" not in marker_sets:
  s=new_marker_set('Cog3_4')
  marker_sets["Cog3_4"]=s
s= marker_sets["Cog3_4"]
mark=s.place_marker((499.613, 441.476, 393.556), (1, 1, 0.2), 17.1475)
if "Cog3_5" not in marker_sets:
  s=new_marker_set('Cog3_5')
  marker_sets["Cog3_5"]=s
s= marker_sets["Cog3_5"]
mark=s.place_marker((479.094, 450.653, 410.209), (1, 1, 0.2), 17.1475)
if "Cog3_GFPC" not in marker_sets:
  s=new_marker_set('Cog3_GFPC')
  marker_sets["Cog3_GFPC"]=s
s= marker_sets["Cog3_GFPC"]
mark=s.place_marker((479.04, 548.96, 453.22), (1, 1, 0.4), 18.4716)
if "Cog3_Anch" not in marker_sets:
  s=new_marker_set('Cog3_Anch')
  marker_sets["Cog3_Anch"]=s
s= marker_sets["Cog3_Anch"]
mark=s.place_marker((480.576, 351.176, 373.656), (1, 1, 0.4), 18.4716)
if "Cog4_GFPN" not in marker_sets:
  s=new_marker_set('Cog4_GFPN')
  marker_sets["Cog4_GFPN"]=s
s= marker_sets["Cog4_GFPN"]
mark=s.place_marker((673.497, 390.666, 419.207), (0, 0, 0.8), 18.4716)
if "Cog4_0" not in marker_sets:
  s=new_marker_set('Cog4_0')
  marker_sets["Cog4_0"]=s
s= marker_sets["Cog4_0"]
mark=s.place_marker((673.497, 390.666, 419.207), (0, 0, 0.8), 17.1475)
if "Cog4_1" not in marker_sets:
  s=new_marker_set('Cog4_1')
  marker_sets["Cog4_1"]=s
s= marker_sets["Cog4_1"]
mark=s.place_marker((658.83, 408.297, 437.275), (0, 0, 0.8), 17.1475)
if "Cog4_2" not in marker_sets:
  s=new_marker_set('Cog4_2')
  marker_sets["Cog4_2"]=s
s= marker_sets["Cog4_2"]
mark=s.place_marker((644.149, 425.559, 455.293), (0, 0, 0.8), 17.1475)
if "Cog4_3" not in marker_sets:
  s=new_marker_set('Cog4_3')
  marker_sets["Cog4_3"]=s
s= marker_sets["Cog4_3"]
mark=s.place_marker((626.546, 444.478, 467.926), (0, 0, 0.8), 17.1475)
if "Cog4_4" not in marker_sets:
  s=new_marker_set('Cog4_4')
  marker_sets["Cog4_4"]=s
s= marker_sets["Cog4_4"]
mark=s.place_marker((605.469, 463.335, 473.505), (0, 0, 0.8), 17.1475)
if "Cog4_5" not in marker_sets:
  s=new_marker_set('Cog4_5')
  marker_sets["Cog4_5"]=s
s= marker_sets["Cog4_5"]
mark=s.place_marker((583.358, 481.4, 470.075), (0, 0, 0.8), 17.1475)
if "Cog4_6" not in marker_sets:
  s=new_marker_set('Cog4_6')
  marker_sets["Cog4_6"]=s
s= marker_sets["Cog4_6"]
mark=s.place_marker((561.884, 498.364, 459.575), (0, 0, 0.8), 17.1475)
if "Cog4_GFPC" not in marker_sets:
  s=new_marker_set('Cog4_GFPC')
  marker_sets["Cog4_GFPC"]=s
s= marker_sets["Cog4_GFPC"]
mark=s.place_marker((615.326, 292.629, 312.28), (0, 0, 0.8), 18.4716)
if "Cog4_Anch" not in marker_sets:
  s=new_marker_set('Cog4_Anch')
  marker_sets["Cog4_Anch"]=s
s= marker_sets["Cog4_Anch"]
mark=s.place_marker((486.93, 713.637, 585.084), (0, 0, 0.8), 18.4716)
if "Cog5_GFPN" not in marker_sets:
  s=new_marker_set('Cog5_GFPN')
  marker_sets["Cog5_GFPN"]=s
s= marker_sets["Cog5_GFPN"]
mark=s.place_marker((588.597, 521.567, 466.245), (0.3, 0.3, 0.3), 18.4716)
if "Cog5_0" not in marker_sets:
  s=new_marker_set('Cog5_0')
  marker_sets["Cog5_0"]=s
s= marker_sets["Cog5_0"]
mark=s.place_marker((588.597, 521.567, 466.245), (0.3, 0.3, 0.3), 17.1475)
if "Cog5_1" not in marker_sets:
  s=new_marker_set('Cog5_1')
  marker_sets["Cog5_1"]=s
s= marker_sets["Cog5_1"]
mark=s.place_marker((581.12, 523.025, 438.528), (0.3, 0.3, 0.3), 17.1475)
if "Cog5_2" not in marker_sets:
  s=new_marker_set('Cog5_2')
  marker_sets["Cog5_2"]=s
s= marker_sets["Cog5_2"]
mark=s.place_marker((577.383, 534.584, 411.93), (0.3, 0.3, 0.3), 17.1475)
if "Cog5_3" not in marker_sets:
  s=new_marker_set('Cog5_3')
  marker_sets["Cog5_3"]=s
s= marker_sets["Cog5_3"]
mark=s.place_marker((590.151, 557.636, 400.096), (0.3, 0.3, 0.3), 17.1475)
if "Cog5_GFPC" not in marker_sets:
  s=new_marker_set('Cog5_GFPC')
  marker_sets["Cog5_GFPC"]=s
s= marker_sets["Cog5_GFPC"]
mark=s.place_marker((468.427, 583.357, 396.507), (0.3, 0.3, 0.3), 18.4716)
if "Cog5_Anch" not in marker_sets:
  s=new_marker_set('Cog5_Anch')
  marker_sets["Cog5_Anch"]=s
s= marker_sets["Cog5_Anch"]
mark=s.place_marker((714.296, 539.961, 401.056), (0.3, 0.3, 0.3), 18.4716)
if "Cog6_GFPN" not in marker_sets:
  s=new_marker_set('Cog6_GFPN')
  marker_sets["Cog6_GFPN"]=s
s= marker_sets["Cog6_GFPN"]
mark=s.place_marker((511.432, 560.558, 418.793), (0.21, 0.49, 0.72), 18.4716)
if "Cog6_0" not in marker_sets:
  s=new_marker_set('Cog6_0')
  marker_sets["Cog6_0"]=s
s= marker_sets["Cog6_0"]
mark=s.place_marker((511.432, 560.592, 418.737), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_1" not in marker_sets:
  s=new_marker_set('Cog6_1')
  marker_sets["Cog6_1"]=s
s= marker_sets["Cog6_1"]
mark=s.place_marker((495.083, 577.476, 434.513), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_2" not in marker_sets:
  s=new_marker_set('Cog6_2')
  marker_sets["Cog6_2"]=s
s= marker_sets["Cog6_2"]
mark=s.place_marker((483.455, 561.702, 454.94), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_3" not in marker_sets:
  s=new_marker_set('Cog6_3')
  marker_sets["Cog6_3"]=s
s= marker_sets["Cog6_3"]
mark=s.place_marker((474.817, 535.619, 461.408), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_4" not in marker_sets:
  s=new_marker_set('Cog6_4')
  marker_sets["Cog6_4"]=s
s= marker_sets["Cog6_4"]
mark=s.place_marker((478.674, 508.747, 453.395), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_5" not in marker_sets:
  s=new_marker_set('Cog6_5')
  marker_sets["Cog6_5"]=s
s= marker_sets["Cog6_5"]
mark=s.place_marker((480.033, 481.029, 447.855), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_6" not in marker_sets:
  s=new_marker_set('Cog6_6')
  marker_sets["Cog6_6"]=s
s= marker_sets["Cog6_6"]
mark=s.place_marker((482.143, 452.716, 442.624), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_GFPC" not in marker_sets:
  s=new_marker_set('Cog6_GFPC')
  marker_sets["Cog6_GFPC"]=s
s= marker_sets["Cog6_GFPC"]
mark=s.place_marker((519.426, 501.731, 500.317), (0.21, 0.49, 0.72), 18.4716)
if "Cog6_Anch" not in marker_sets:
  s=new_marker_set('Cog6_Anch')
  marker_sets["Cog6_Anch"]=s
s= marker_sets["Cog6_Anch"]
mark=s.place_marker((446.248, 399.583, 381.235), (0.21, 0.49, 0.72), 18.4716)
if "Cog7_GFPN" not in marker_sets:
  s=new_marker_set('Cog7_GFPN')
  marker_sets["Cog7_GFPN"]=s
s= marker_sets["Cog7_GFPN"]
mark=s.place_marker((539.353, 543.386, 500.727), (0.7, 0.7, 0.7), 18.4716)
if "Cog7_0" not in marker_sets:
  s=new_marker_set('Cog7_0')
  marker_sets["Cog7_0"]=s
s= marker_sets["Cog7_0"]
mark=s.place_marker((544.605, 549.19, 475.527), (0.7, 0.7, 0.7), 17.1475)
if "Cog7_1" not in marker_sets:
  s=new_marker_set('Cog7_1')
  marker_sets["Cog7_1"]=s
s= marker_sets["Cog7_1"]
mark=s.place_marker((558.005, 563.544, 421.894), (0.7, 0.7, 0.7), 17.1475)
if "Cog7_2" not in marker_sets:
  s=new_marker_set('Cog7_2')
  marker_sets["Cog7_2"]=s
s= marker_sets["Cog7_2"]
mark=s.place_marker((571.436, 577.947, 368.209), (0.7, 0.7, 0.7), 17.1475)
if "Cog7_GFPC" not in marker_sets:
  s=new_marker_set('Cog7_GFPC')
  marker_sets["Cog7_GFPC"]=s
s= marker_sets["Cog7_GFPC"]
mark=s.place_marker((508.62, 629.225, 376.098), (0.7, 0.7, 0.7), 18.4716)
if "Cog7_Anch" not in marker_sets:
  s=new_marker_set('Cog7_Anch')
  marker_sets["Cog7_Anch"]=s
s= marker_sets["Cog7_Anch"]
mark=s.place_marker((636.519, 560.093, 288.137), (0.7, 0.7, 0.7), 18.4716)
if "Cog8_0" not in marker_sets:
  s=new_marker_set('Cog8_0')
  marker_sets["Cog8_0"]=s
s= marker_sets["Cog8_0"]
mark=s.place_marker((472.676, 619.045, 435.739), (1, 0.5, 0), 17.1475)
if "Cog8_1" not in marker_sets:
  s=new_marker_set('Cog8_1')
  marker_sets["Cog8_1"]=s
s= marker_sets["Cog8_1"]
mark=s.place_marker((499.53, 611.251, 440.339), (1, 0.5, 0), 17.1475)
if "Cog8_2" not in marker_sets:
  s=new_marker_set('Cog8_2')
  marker_sets["Cog8_2"]=s
s= marker_sets["Cog8_2"]
mark=s.place_marker((527.38, 605.614, 443.715), (1, 0.5, 0), 17.1475)
if "Cog8_3" not in marker_sets:
  s=new_marker_set('Cog8_3')
  marker_sets["Cog8_3"]=s
s= marker_sets["Cog8_3"]
mark=s.place_marker((555.974, 601.89, 445.831), (1, 0.5, 0), 17.1475)
if "Cog8_4" not in marker_sets:
  s=new_marker_set('Cog8_4')
  marker_sets["Cog8_4"]=s
s= marker_sets["Cog8_4"]
mark=s.place_marker((584.887, 597.686, 447.026), (1, 0.5, 0), 17.1475)
if "Cog8_5" not in marker_sets:
  s=new_marker_set('Cog8_5')
  marker_sets["Cog8_5"]=s
s= marker_sets["Cog8_5"]
mark=s.place_marker((613.591, 591.044, 448.529), (1, 0.5, 0), 17.1475)
if "Cog8_GFPC" not in marker_sets:
  s=new_marker_set('Cog8_GFPC')
  marker_sets["Cog8_GFPC"]=s
s= marker_sets["Cog8_GFPC"]
mark=s.place_marker((539.329, 564.984, 455.17), (1, 0.6, 0.1), 18.4716)
if "Cog8_Anch" not in marker_sets:
  s=new_marker_set('Cog8_Anch')
  marker_sets["Cog8_Anch"]=s
s= marker_sets["Cog8_Anch"]
mark=s.place_marker((694.073, 613.407, 442.164), (1, 0.6, 0.1), 18.4716)
for k in surf_sets.keys():
  chimera.openModels.add([surf_sets[k]])

dde6c213fd5ef50339fa753998418fb3633a5126
<mask token>

<mask token>
try:
    import chimera.runCommand
except:
    pass
<mask token>
try:
    from VolumePath import Marker_Set, Link
    new_marker_set = Marker_Set
except:
    from VolumePath import volume_path_dialog
    d = volume_path_dialog(True)
    new_marker_set = d.new_marker_set
<mask token>
if 'Cog2_GFPN' not in marker_sets:
    s = new_marker_set('Cog2_GFPN')
    marker_sets['Cog2_GFPN'] = s
<mask token>
if 'Cog2_0' not in marker_sets:
    s = new_marker_set('Cog2_0')
    marker_sets['Cog2_0'] = s
<mask token>
if 'Cog2_1' not in marker_sets:
    s = new_marker_set('Cog2_1')
    marker_sets['Cog2_1'] = s
<mask token>
if 'Cog2_GFPC' not in marker_sets:
    s = new_marker_set('Cog2_GFPC')
    marker_sets['Cog2_GFPC'] = s
<mask token>
if 'Cog2_Anch' not in marker_sets:
    s = new_marker_set('Cog2_Anch')
    marker_sets['Cog2_Anch'] = s
<mask token>
if 'Cog3_GFPN' not in marker_sets:
    s = new_marker_set('Cog3_GFPN')
    marker_sets['Cog3_GFPN'] = s
<mask token>
if 'Cog3_0' not in marker_sets:
    s = new_marker_set('Cog3_0')
    marker_sets['Cog3_0'] = s
<mask token>
if 'Cog3_1' not in marker_sets:
    s = new_marker_set('Cog3_1')
    marker_sets['Cog3_1'] = s
<mask token>
if 'Cog3_2' not in marker_sets:
    s = new_marker_set('Cog3_2')
    marker_sets['Cog3_2'] = s
<mask token>
if 'Cog3_3' not in marker_sets:
    s = new_marker_set('Cog3_3')
    marker_sets['Cog3_3'] = s
<mask token>
if 'Cog3_4' not in marker_sets:
    s = new_marker_set('Cog3_4')
    marker_sets['Cog3_4'] = s
<mask token>
if 'Cog3_5' not in marker_sets:
    s = new_marker_set('Cog3_5')
    marker_sets['Cog3_5'] = s
<mask token>
if 'Cog3_GFPC' not in marker_sets:
    s = new_marker_set('Cog3_GFPC')
    marker_sets['Cog3_GFPC'] = s
<mask token>
if 'Cog3_Anch' not in marker_sets:
    s = new_marker_set('Cog3_Anch')
    marker_sets['Cog3_Anch'] = s
<mask token>
if 'Cog4_GFPN' not in marker_sets:
    s = new_marker_set('Cog4_GFPN')
    marker_sets['Cog4_GFPN'] = s
<mask token>
if 'Cog4_0' not in marker_sets:
    s = new_marker_set('Cog4_0')
    marker_sets['Cog4_0'] = s
<mask token>
if 'Cog4_1' not in marker_sets:
    s = new_marker_set('Cog4_1')
    marker_sets['Cog4_1'] = s
<mask token>
if 'Cog4_2' not in marker_sets:
    s = new_marker_set('Cog4_2')
    marker_sets['Cog4_2'] = s
<mask token>
if 'Cog4_3' not in marker_sets:
    s = new_marker_set('Cog4_3')
    marker_sets['Cog4_3'] = s
<mask token>
if 'Cog4_4' not in marker_sets:
    s = new_marker_set('Cog4_4')
    marker_sets['Cog4_4'] = s
<mask token>
if 'Cog4_5' not in marker_sets:
    s = new_marker_set('Cog4_5')
    marker_sets['Cog4_5'] = s
<mask token>
if 'Cog4_6' not in marker_sets:
    s = new_marker_set('Cog4_6')
    marker_sets['Cog4_6'] = s
<mask token>
if 'Cog4_GFPC' not in marker_sets:
    s = new_marker_set('Cog4_GFPC')
    marker_sets['Cog4_GFPC'] = s
<mask token>
if 'Cog4_Anch' not in marker_sets:
    s = new_marker_set('Cog4_Anch')
    marker_sets['Cog4_Anch'] = s
<mask token>
if 'Cog5_GFPN' not in marker_sets:
    s = new_marker_set('Cog5_GFPN')
    marker_sets['Cog5_GFPN'] = s
<mask token>
if 'Cog5_0' not in marker_sets:
    s = new_marker_set('Cog5_0')
    marker_sets['Cog5_0'] = s
<mask token>
if 'Cog5_1' not in marker_sets:
    s = new_marker_set('Cog5_1')
    marker_sets['Cog5_1'] = s
<mask token>
if 'Cog5_2' not in marker_sets:
    s = new_marker_set('Cog5_2')
    marker_sets['Cog5_2'] = s
<mask token>
if 'Cog5_3' not in marker_sets:
    s = new_marker_set('Cog5_3')
    marker_sets['Cog5_3'] = s
<mask token>
if 'Cog5_GFPC' not in marker_sets:
    s = new_marker_set('Cog5_GFPC')
    marker_sets['Cog5_GFPC'] = s
<mask token>
if 'Cog5_Anch' not in marker_sets:
    s = new_marker_set('Cog5_Anch')
    marker_sets['Cog5_Anch'] = s
<mask token>
if 'Cog6_GFPN' not in marker_sets:
    s = new_marker_set('Cog6_GFPN')
    marker_sets['Cog6_GFPN'] = s
<mask token>
if 'Cog6_0' not in marker_sets:
    s = new_marker_set('Cog6_0')
    marker_sets['Cog6_0'] = s
<mask token>
if 'Cog6_1' not in marker_sets:
    s = new_marker_set('Cog6_1')
    marker_sets['Cog6_1'] = s
<mask token>
if 'Cog6_2' not in marker_sets:
    s = new_marker_set('Cog6_2')
    marker_sets['Cog6_2'] = s
<mask token>
if 'Cog6_3' not in marker_sets:
    s = new_marker_set('Cog6_3')
    marker_sets['Cog6_3'] = s
<mask token>
if 'Cog6_4' not in marker_sets:
    s = new_marker_set('Cog6_4')
    marker_sets['Cog6_4'] = s
<mask token>
if 'Cog6_5' not in marker_sets:
    s = new_marker_set('Cog6_5')
    marker_sets['Cog6_5'] = s
<mask token>
if 'Cog6_6' not in marker_sets:
    s = new_marker_set('Cog6_6')
    marker_sets['Cog6_6'] = s
<mask token>
if 'Cog6_GFPC' not in marker_sets:
    s = new_marker_set('Cog6_GFPC')
    marker_sets['Cog6_GFPC'] = s
<mask token>
if 'Cog6_Anch' not in marker_sets:
    s = new_marker_set('Cog6_Anch')
    marker_sets['Cog6_Anch'] = s
<mask token>
if 'Cog7_GFPN' not in marker_sets:
    s = new_marker_set('Cog7_GFPN')
    marker_sets['Cog7_GFPN'] = s
<mask token>
if 'Cog7_0' not in marker_sets:
    s = new_marker_set('Cog7_0')
    marker_sets['Cog7_0'] = s
<mask token>
if 'Cog7_1' not in marker_sets:
    s = new_marker_set('Cog7_1')
    marker_sets['Cog7_1'] = s
<mask token>
if 'Cog7_2' not in marker_sets:
    s = new_marker_set('Cog7_2')
    marker_sets['Cog7_2'] = s
<mask token>
if 'Cog7_GFPC' not in marker_sets:
    s = new_marker_set('Cog7_GFPC')
    marker_sets['Cog7_GFPC'] = s
<mask token>
if 'Cog7_Anch' not in marker_sets:
    s = new_marker_set('Cog7_Anch')
    marker_sets['Cog7_Anch'] = s
<mask token>
if 'Cog8_0' not in marker_sets:
    s = new_marker_set('Cog8_0')
    marker_sets['Cog8_0'] = s
<mask token>
if 'Cog8_1' not in marker_sets:
    s = new_marker_set('Cog8_1')
    marker_sets['Cog8_1'] = s
<mask token>
if 'Cog8_2' not in marker_sets:
    s = new_marker_set('Cog8_2')
    marker_sets['Cog8_2'] = s
<mask token>
if 'Cog8_3' not in marker_sets:
    s = new_marker_set('Cog8_3')
    marker_sets['Cog8_3'] = s
<mask token>
if 'Cog8_4' not in marker_sets:
    s = new_marker_set('Cog8_4')
    marker_sets['Cog8_4'] = s
<mask token>
if 'Cog8_5' not in marker_sets:
    s = new_marker_set('Cog8_5')
    marker_sets['Cog8_5'] = s
<mask token>
if 'Cog8_GFPC' not in marker_sets:
    s = new_marker_set('Cog8_GFPC')
    marker_sets['Cog8_GFPC'] = s
<mask token>
if 'Cog8_Anch' not in marker_sets:
    s = new_marker_set('Cog8_Anch')
    marker_sets['Cog8_Anch'] = s
<mask token>
for k in surf_sets.keys():
    chimera.openModels.add([surf_sets[k]])

<mask token>
try:
    import chimera.runCommand
except:
    pass
<mask token>
try:
    from VolumePath import Marker_Set, Link
    new_marker_set = Marker_Set
except:
    from VolumePath import volume_path_dialog
    d = volume_path_dialog(True)
    new_marker_set = d.new_marker_set
marker_sets = {}
surf_sets = {}
if 'Cog2_GFPN' not in marker_sets:
    s = new_marker_set('Cog2_GFPN')
    marker_sets['Cog2_GFPN'] = s
s = marker_sets['Cog2_GFPN']
mark = s.place_marker((455.091, 548.131, 441.132), (0.89, 0.1, 0.1), 18.4716)
if 'Cog2_0' not in marker_sets:
    s = new_marker_set('Cog2_0')
    marker_sets['Cog2_0'] = s
s = marker_sets['Cog2_0']
mark = s.place_marker((523.214, 547.7, 441.398), (0.89, 0.1, 0.1), 17.1475)
if 'Cog2_1' not in marker_sets:
    s = new_marker_set('Cog2_1')
    marker_sets['Cog2_1'] = s
s = marker_sets['Cog2_1']
mark = s.place_marker((604.168, 545.527, 428.693), (0.89, 0.1, 0.1), 17.1475)
if 'Cog2_GFPC' not in marker_sets:
    s = new_marker_set('Cog2_GFPC')
    marker_sets['Cog2_GFPC'] = s
s = marker_sets['Cog2_GFPC']
mark = s.place_marker((518.447, 575.68, 322.142), (0.89, 0.1, 0.1), 18.4716)
if 'Cog2_Anch' not in marker_sets:
    s = new_marker_set('Cog2_Anch')
    marker_sets['Cog2_Anch'] = s
s = marker_sets['Cog2_Anch']
mark = s.place_marker((797.322, 526.929, 442.213), (0.89, 0.1, 0.1), 18.4716)
if 'Cog3_GFPN' not in marker_sets:
    s = new_marker_set('Cog3_GFPN')
    marker_sets['Cog3_GFPN'] = s
s = marker_sets['Cog3_GFPN']
mark = s.place_marker((500.094, 537.392, 437.867), (1, 1, 0), 18.4716)
if 'Cog3_0' not in marker_sets:
    s = new_marker_set('Cog3_0')
    marker_sets['Cog3_0'] = s
s = marker_sets['Cog3_0']
mark = s.place_marker((499.049, 536.799, 437.736), (1, 1, 0.2), 17.1475)
if 'Cog3_1' not in marker_sets:
    s = new_marker_set('Cog3_1')
    marker_sets['Cog3_1'] = s
s = marker_sets['Cog3_1']
mark = s.place_marker((507.795, 510.364, 433.323), (1, 1, 0.2), 17.1475)
if 'Cog3_2' not in marker_sets:
    s = new_marker_set('Cog3_2')
    marker_sets['Cog3_2'] = s
s = marker_sets['Cog3_2']
mark = s.place_marker((506.351, 483.306, 425.224), (1, 1, 0.2), 17.1475)
if 'Cog3_3' not in marker_sets:
    s = new_marker_set('Cog3_3')
    marker_sets['Cog3_3'] = s
s = marker_sets['Cog3_3']
mark = s.place_marker((512.173, 459.896, 410.9), (1, 1, 0.2), 17.1475)
if 'Cog3_4' not in marker_sets:
    s = new_marker_set('Cog3_4')
    marker_sets['Cog3_4'] = s
s = marker_sets['Cog3_4']
mark = s.place_marker((499.613, 441.476, 393.556), (1, 1, 0.2), 17.1475)
if 'Cog3_5' not in marker_sets:
    s = new_marker_set('Cog3_5')
    marker_sets['Cog3_5'] = s
s = marker_sets['Cog3_5']
mark = s.place_marker((479.094, 450.653, 410.209), (1, 1, 0.2), 17.1475)
if 'Cog3_GFPC' not in marker_sets:
    s = new_marker_set('Cog3_GFPC')
    marker_sets['Cog3_GFPC'] = s
s = marker_sets['Cog3_GFPC']
mark = s.place_marker((479.04, 548.96, 453.22), (1, 1, 0.4), 18.4716)
if 'Cog3_Anch' not in marker_sets:
    s = new_marker_set('Cog3_Anch')
    marker_sets['Cog3_Anch'] = s
s = marker_sets['Cog3_Anch']
mark = s.place_marker((480.576, 351.176, 373.656), (1, 1, 0.4), 18.4716)
if 'Cog4_GFPN' not in marker_sets:
    s = new_marker_set('Cog4_GFPN')
    marker_sets['Cog4_GFPN'] = s
s = marker_sets['Cog4_GFPN']
mark = s.place_marker((673.497, 390.666, 419.207), (0, 0, 0.8), 18.4716)
if 'Cog4_0' not in marker_sets:
    s = new_marker_set('Cog4_0')
    marker_sets['Cog4_0'] = s
s = marker_sets['Cog4_0']
mark = s.place_marker((673.497, 390.666, 419.207), (0, 0, 0.8), 17.1475)
if 'Cog4_1' not in marker_sets:
    s = new_marker_set('Cog4_1')
    marker_sets['Cog4_1'] = s
s = marker_sets['Cog4_1']
mark = s.place_marker((658.83, 408.297, 437.275), (0, 0, 0.8), 17.1475)
if 'Cog4_2' not in marker_sets:
    s = new_marker_set('Cog4_2')
    marker_sets['Cog4_2'] = s
s = marker_sets['Cog4_2']
mark = s.place_marker((644.149, 425.559, 455.293), (0, 0, 0.8), 17.1475)
if 'Cog4_3' not in marker_sets:
    s = new_marker_set('Cog4_3')
    marker_sets['Cog4_3'] = s
s = marker_sets['Cog4_3']
mark = s.place_marker((626.546, 444.478, 467.926), (0, 0, 0.8), 17.1475)
if 'Cog4_4' not in marker_sets:
    s = new_marker_set('Cog4_4')
    marker_sets['Cog4_4'] = s
s = marker_sets['Cog4_4']
mark = s.place_marker((605.469, 463.335, 473.505), (0, 0, 0.8), 17.1475)
if 'Cog4_5' not in marker_sets:
    s = new_marker_set('Cog4_5')
    marker_sets['Cog4_5'] = s
s = marker_sets['Cog4_5']
mark = s.place_marker((583.358, 481.4, 470.075), (0, 0, 0.8), 17.1475)
if 'Cog4_6' not in marker_sets:
    s = new_marker_set('Cog4_6')
    marker_sets['Cog4_6'] = s
s = marker_sets['Cog4_6']
mark = s.place_marker((561.884, 498.364, 459.575), (0, 0, 0.8), 17.1475)
if 'Cog4_GFPC' not in marker_sets:
    s = new_marker_set('Cog4_GFPC')
    marker_sets['Cog4_GFPC'] = s
s = marker_sets['Cog4_GFPC']
mark = s.place_marker((615.326, 292.629, 312.28), (0, 0, 0.8), 18.4716)
if 'Cog4_Anch' not in marker_sets:
    s = new_marker_set('Cog4_Anch')
    marker_sets['Cog4_Anch'] = s
s = marker_sets['Cog4_Anch']
mark = s.place_marker((486.93, 713.637, 585.084), (0, 0, 0.8), 18.4716)
if 'Cog5_GFPN' not in marker_sets:
    s = new_marker_set('Cog5_GFPN')
    marker_sets['Cog5_GFPN'] = s
s = marker_sets['Cog5_GFPN']
mark = s.place_marker((588.597, 521.567, 466.245), (0.3, 0.3, 0.3), 18.4716)
if 'Cog5_0' not in marker_sets:
    s = new_marker_set('Cog5_0')
    marker_sets['Cog5_0'] = s
s = marker_sets['Cog5_0']
mark = s.place_marker((588.597, 521.567, 466.245), (0.3, 0.3, 0.3), 17.1475)
if 'Cog5_1' not in marker_sets:
    s = new_marker_set('Cog5_1')
    marker_sets['Cog5_1'] = s
s = marker_sets['Cog5_1']
mark = s.place_marker((581.12, 523.025, 438.528), (0.3, 0.3, 0.3), 17.1475)
if 'Cog5_2' not in marker_sets:
    s = new_marker_set('Cog5_2')
    marker_sets['Cog5_2'] = s
s = marker_sets['Cog5_2']
mark = s.place_marker((577.383, 534.584, 411.93), (0.3, 0.3, 0.3), 17.1475)
if 'Cog5_3' not in marker_sets:
    s = new_marker_set('Cog5_3')
    marker_sets['Cog5_3'] = s
s = marker_sets['Cog5_3']
mark = s.place_marker((590.151, 557.636, 400.096), (0.3, 0.3, 0.3), 17.1475)
if 'Cog5_GFPC' not in marker_sets:
    s = new_marker_set('Cog5_GFPC')
    marker_sets['Cog5_GFPC'] = s
s = marker_sets['Cog5_GFPC']
mark = s.place_marker((468.427, 583.357, 396.507), (0.3, 0.3, 0.3), 18.4716)
if 'Cog5_Anch' not in marker_sets:
    s = new_marker_set('Cog5_Anch')
    marker_sets['Cog5_Anch'] = s
s = marker_sets['Cog5_Anch']
mark = s.place_marker((714.296, 539.961, 401.056), (0.3, 0.3, 0.3), 18.4716)
if 'Cog6_GFPN' not in marker_sets:
    s = new_marker_set('Cog6_GFPN')
    marker_sets['Cog6_GFPN'] = s
s = marker_sets['Cog6_GFPN']
mark = s.place_marker((511.432, 560.558, 418.793), (0.21, 0.49, 0.72), 18.4716)
if 'Cog6_0' not in marker_sets:
    s = new_marker_set('Cog6_0')
    marker_sets['Cog6_0'] = s
s = marker_sets['Cog6_0']
mark = s.place_marker((511.432, 560.592, 418.737), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_1' not in marker_sets:
    s = new_marker_set('Cog6_1')
    marker_sets['Cog6_1'] = s
s = marker_sets['Cog6_1']
mark = s.place_marker((495.083, 577.476, 434.513), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_2' not in marker_sets:
    s = new_marker_set('Cog6_2')
    marker_sets['Cog6_2'] = s
s = marker_sets['Cog6_2']
mark = s.place_marker((483.455, 561.702, 454.94), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_3' not in marker_sets:
    s = new_marker_set('Cog6_3')
    marker_sets['Cog6_3'] = s
s = marker_sets['Cog6_3']
mark = s.place_marker((474.817, 535.619, 461.408), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_4' not in marker_sets:
    s = new_marker_set('Cog6_4')
    marker_sets['Cog6_4'] = s
s = marker_sets['Cog6_4']
mark = s.place_marker((478.674, 508.747, 453.395), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_5' not in marker_sets:
    s = new_marker_set('Cog6_5')
    marker_sets['Cog6_5'] = s
s = marker_sets['Cog6_5']
mark = s.place_marker((480.033, 481.029, 447.855), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_6' not in marker_sets:
    s = new_marker_set('Cog6_6')
    marker_sets['Cog6_6'] = s
s = marker_sets['Cog6_6']
mark = s.place_marker((482.143, 452.716, 442.624), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_GFPC' not in marker_sets:
    s = new_marker_set('Cog6_GFPC')
    marker_sets['Cog6_GFPC'] = s
s = marker_sets['Cog6_GFPC']
mark = s.place_marker((519.426, 501.731, 500.317), (0.21, 0.49, 0.72), 18.4716)
if 'Cog6_Anch' not in marker_sets:
    s = new_marker_set('Cog6_Anch')
    marker_sets['Cog6_Anch'] = s
s = marker_sets['Cog6_Anch']
mark = s.place_marker((446.248, 399.583, 381.235), (0.21, 0.49, 0.72), 18.4716)
if 'Cog7_GFPN' not in marker_sets:
    s = new_marker_set('Cog7_GFPN')
    marker_sets['Cog7_GFPN'] = s
s = marker_sets['Cog7_GFPN']
mark = s.place_marker((539.353, 543.386, 500.727), (0.7, 0.7, 0.7), 18.4716)
if 'Cog7_0' not in marker_sets:
    s = new_marker_set('Cog7_0')
    marker_sets['Cog7_0'] = s
s = marker_sets['Cog7_0']
mark = s.place_marker((544.605, 549.19, 475.527), (0.7, 0.7, 0.7), 17.1475)
if 'Cog7_1' not in marker_sets:
    s = new_marker_set('Cog7_1')
    marker_sets['Cog7_1'] = s
s = marker_sets['Cog7_1']
mark = s.place_marker((558.005, 563.544, 421.894), (0.7, 0.7, 0.7), 17.1475)
if 'Cog7_2' not in marker_sets:
    s = new_marker_set('Cog7_2')
    marker_sets['Cog7_2'] = s
s = marker_sets['Cog7_2']
mark = s.place_marker((571.436, 577.947, 368.209), (0.7, 0.7, 0.7), 17.1475)
if 'Cog7_GFPC' not in marker_sets:
    s = new_marker_set('Cog7_GFPC')
    marker_sets['Cog7_GFPC'] = s
s = marker_sets['Cog7_GFPC']
mark = s.place_marker((508.62, 629.225, 376.098), (0.7, 0.7, 0.7), 18.4716)
if 'Cog7_Anch' not in marker_sets:
    s = new_marker_set('Cog7_Anch')
    marker_sets['Cog7_Anch'] = s
s = marker_sets['Cog7_Anch']
mark = s.place_marker((636.519, 560.093, 288.137), (0.7, 0.7, 0.7), 18.4716)
if 'Cog8_0' not in marker_sets:
    s = new_marker_set('Cog8_0')
    marker_sets['Cog8_0'] = s
s = marker_sets['Cog8_0']
mark = s.place_marker((472.676, 619.045, 435.739), (1, 0.5, 0), 17.1475)
if 'Cog8_1' not in marker_sets:
    s = new_marker_set('Cog8_1')
    marker_sets['Cog8_1'] = s
s = marker_sets['Cog8_1']
mark = s.place_marker((499.53, 611.251, 440.339), (1, 0.5, 0), 17.1475)
if 'Cog8_2' not in marker_sets:
    s = new_marker_set('Cog8_2')
    marker_sets['Cog8_2'] = s
s = marker_sets['Cog8_2']
mark = s.place_marker((527.38, 605.614, 443.715), (1, 0.5, 0), 17.1475)
if 'Cog8_3' not in marker_sets:
    s = new_marker_set('Cog8_3')
    marker_sets['Cog8_3'] = s
s = marker_sets['Cog8_3']
mark = s.place_marker((555.974, 601.89, 445.831), (1, 0.5, 0), 17.1475)
if 'Cog8_4' not in marker_sets:
    s = new_marker_set('Cog8_4')
    marker_sets['Cog8_4'] = s
s = marker_sets['Cog8_4']
mark = s.place_marker((584.887, 597.686, 447.026), (1, 0.5, 0), 17.1475)
if 'Cog8_5' not in marker_sets:
    s = new_marker_set('Cog8_5')
    marker_sets['Cog8_5'] = s
s = marker_sets['Cog8_5']
mark = s.place_marker((613.591, 591.044, 448.529), (1, 0.5, 0), 17.1475)
if 'Cog8_GFPC' not in marker_sets:
    s = new_marker_set('Cog8_GFPC')
    marker_sets['Cog8_GFPC'] = s
s = marker_sets['Cog8_GFPC']
mark = s.place_marker((539.329, 564.984, 455.17), (1, 0.6, 0.1), 18.4716)
if 'Cog8_Anch' not in marker_sets:
    s = new_marker_set('Cog8_Anch')
    marker_sets['Cog8_Anch'] = s
s = marker_sets['Cog8_Anch']
mark = s.place_marker((694.073, 613.407, 442.164), (1, 0.6, 0.1), 18.4716)
for k in surf_sets.keys():
    chimera.openModels.add([surf_sets[k]])

import _surface
import chimera
try:
    import chimera.runCommand
except:
    pass
from VolumePath import markerset as ms
try:
    from VolumePath import Marker_Set, Link
    new_marker_set = Marker_Set
except:
    from VolumePath import volume_path_dialog
    d = volume_path_dialog(True)
    new_marker_set = d.new_marker_set
marker_sets = {}
surf_sets = {}
if 'Cog2_GFPN' not in marker_sets:
    s = new_marker_set('Cog2_GFPN')
    marker_sets['Cog2_GFPN'] = s
s = marker_sets['Cog2_GFPN']
mark = s.place_marker((455.091, 548.131, 441.132), (0.89, 0.1, 0.1), 18.4716)
if 'Cog2_0' not in marker_sets:
    s = new_marker_set('Cog2_0')
    marker_sets['Cog2_0'] = s
s = marker_sets['Cog2_0']
mark = s.place_marker((523.214, 547.7, 441.398), (0.89, 0.1, 0.1), 17.1475)
if 'Cog2_1' not in marker_sets:
    s = new_marker_set('Cog2_1')
    marker_sets['Cog2_1'] = s
s = marker_sets['Cog2_1']
mark = s.place_marker((604.168, 545.527, 428.693), (0.89, 0.1, 0.1), 17.1475)
if 'Cog2_GFPC' not in marker_sets:
    s = new_marker_set('Cog2_GFPC')
    marker_sets['Cog2_GFPC'] = s
s = marker_sets['Cog2_GFPC']
mark = s.place_marker((518.447, 575.68, 322.142), (0.89, 0.1, 0.1), 18.4716)
if 'Cog2_Anch' not in marker_sets:
    s = new_marker_set('Cog2_Anch')
    marker_sets['Cog2_Anch'] = s
s = marker_sets['Cog2_Anch']
mark = s.place_marker((797.322, 526.929, 442.213), (0.89, 0.1, 0.1), 18.4716)
if 'Cog3_GFPN' not in marker_sets:
    s = new_marker_set('Cog3_GFPN')
    marker_sets['Cog3_GFPN'] = s
s = marker_sets['Cog3_GFPN']
mark = s.place_marker((500.094, 537.392, 437.867), (1, 1, 0), 18.4716)
if 'Cog3_0' not in marker_sets:
    s = new_marker_set('Cog3_0')
    marker_sets['Cog3_0'] = s
s = marker_sets['Cog3_0']
mark = s.place_marker((499.049, 536.799, 437.736), (1, 1, 0.2), 17.1475)
if 'Cog3_1' not in marker_sets:
    s = new_marker_set('Cog3_1')
    marker_sets['Cog3_1'] = s
s = marker_sets['Cog3_1']
mark = s.place_marker((507.795, 510.364, 433.323), (1, 1, 0.2), 17.1475)
if 'Cog3_2' not in marker_sets:
    s = new_marker_set('Cog3_2')
    marker_sets['Cog3_2'] = s
s = marker_sets['Cog3_2']
mark = s.place_marker((506.351, 483.306, 425.224), (1, 1, 0.2), 17.1475)
if 'Cog3_3' not in marker_sets:
    s = new_marker_set('Cog3_3')
    marker_sets['Cog3_3'] = s
s = marker_sets['Cog3_3']
mark = s.place_marker((512.173, 459.896, 410.9), (1, 1, 0.2), 17.1475)
if 'Cog3_4' not in marker_sets:
    s = new_marker_set('Cog3_4')
    marker_sets['Cog3_4'] = s
s = marker_sets['Cog3_4']
mark = s.place_marker((499.613, 441.476, 393.556), (1, 1, 0.2), 17.1475)
if 'Cog3_5' not in marker_sets:
    s = new_marker_set('Cog3_5')
    marker_sets['Cog3_5'] = s
s = marker_sets['Cog3_5']
mark = s.place_marker((479.094, 450.653, 410.209), (1, 1, 0.2), 17.1475)
if 'Cog3_GFPC' not in marker_sets:
    s = new_marker_set('Cog3_GFPC')
    marker_sets['Cog3_GFPC'] = s
s = marker_sets['Cog3_GFPC']
mark = s.place_marker((479.04, 548.96, 453.22), (1, 1, 0.4), 18.4716)
if 'Cog3_Anch' not in marker_sets:
    s = new_marker_set('Cog3_Anch')
    marker_sets['Cog3_Anch'] = s
s = marker_sets['Cog3_Anch']
mark = s.place_marker((480.576, 351.176, 373.656), (1, 1, 0.4), 18.4716)
if 'Cog4_GFPN' not in marker_sets:
    s = new_marker_set('Cog4_GFPN')
    marker_sets['Cog4_GFPN'] = s
s = marker_sets['Cog4_GFPN']
mark = s.place_marker((673.497, 390.666, 419.207), (0, 0, 0.8), 18.4716)
if 'Cog4_0' not in marker_sets:
    s = new_marker_set('Cog4_0')
    marker_sets['Cog4_0'] = s
s = marker_sets['Cog4_0']
mark = s.place_marker((673.497, 390.666, 419.207), (0, 0, 0.8), 17.1475)
if 'Cog4_1' not in marker_sets:
    s = new_marker_set('Cog4_1')
    marker_sets['Cog4_1'] = s
s = marker_sets['Cog4_1']
mark = s.place_marker((658.83, 408.297, 437.275), (0, 0, 0.8), 17.1475)
if 'Cog4_2' not in marker_sets:
    s = new_marker_set('Cog4_2')
    marker_sets['Cog4_2'] = s
s = marker_sets['Cog4_2']
mark = s.place_marker((644.149, 425.559, 455.293), (0, 0, 0.8), 17.1475)
if 'Cog4_3' not in marker_sets:
    s = new_marker_set('Cog4_3')
    marker_sets['Cog4_3'] = s
s = marker_sets['Cog4_3']
mark = s.place_marker((626.546, 444.478, 467.926), (0, 0, 0.8), 17.1475)
if 'Cog4_4' not in marker_sets:
    s = new_marker_set('Cog4_4')
    marker_sets['Cog4_4'] = s
s = marker_sets['Cog4_4']
mark = s.place_marker((605.469, 463.335, 473.505), (0, 0, 0.8), 17.1475)
if 'Cog4_5' not in marker_sets:
    s = new_marker_set('Cog4_5')
    marker_sets['Cog4_5'] = s
s = marker_sets['Cog4_5']
mark = s.place_marker((583.358, 481.4, 470.075), (0, 0, 0.8), 17.1475)
if 'Cog4_6' not in marker_sets:
    s = new_marker_set('Cog4_6')
    marker_sets['Cog4_6'] = s
s = marker_sets['Cog4_6']
mark = s.place_marker((561.884, 498.364, 459.575), (0, 0, 0.8), 17.1475)
if 'Cog4_GFPC' not in marker_sets:
    s = new_marker_set('Cog4_GFPC')
    marker_sets['Cog4_GFPC'] = s
s = marker_sets['Cog4_GFPC']
mark = s.place_marker((615.326, 292.629, 312.28), (0, 0, 0.8), 18.4716)
if 'Cog4_Anch' not in marker_sets:
    s = new_marker_set('Cog4_Anch')
    marker_sets['Cog4_Anch'] = s
s = marker_sets['Cog4_Anch']
mark = s.place_marker((486.93, 713.637, 585.084), (0, 0, 0.8), 18.4716)
if 'Cog5_GFPN' not in marker_sets:
    s = new_marker_set('Cog5_GFPN')
    marker_sets['Cog5_GFPN'] = s
s = marker_sets['Cog5_GFPN']
mark = s.place_marker((588.597, 521.567, 466.245), (0.3, 0.3, 0.3), 18.4716)
if 'Cog5_0' not in marker_sets:
    s = new_marker_set('Cog5_0')
    marker_sets['Cog5_0'] = s
s = marker_sets['Cog5_0']
mark = s.place_marker((588.597, 521.567, 466.245), (0.3, 0.3, 0.3), 17.1475)
if 'Cog5_1' not in marker_sets:
    s = new_marker_set('Cog5_1')
    marker_sets['Cog5_1'] = s
s = marker_sets['Cog5_1']
mark = s.place_marker((581.12, 523.025, 438.528), (0.3, 0.3, 0.3), 17.1475)
if 'Cog5_2' not in marker_sets:
    s = new_marker_set('Cog5_2')
    marker_sets['Cog5_2'] = s
s = marker_sets['Cog5_2']
mark = s.place_marker((577.383, 534.584, 411.93), (0.3, 0.3, 0.3), 17.1475)
if 'Cog5_3' not in marker_sets:
    s = new_marker_set('Cog5_3')
    marker_sets['Cog5_3'] = s
s = marker_sets['Cog5_3']
mark = s.place_marker((590.151, 557.636, 400.096), (0.3, 0.3, 0.3), 17.1475)
if 'Cog5_GFPC' not in marker_sets:
    s = new_marker_set('Cog5_GFPC')
    marker_sets['Cog5_GFPC'] = s
s = marker_sets['Cog5_GFPC']
mark = s.place_marker((468.427, 583.357, 396.507), (0.3, 0.3, 0.3), 18.4716)
if 'Cog5_Anch' not in marker_sets:
    s = new_marker_set('Cog5_Anch')
    marker_sets['Cog5_Anch'] = s
s = marker_sets['Cog5_Anch']
mark = s.place_marker((714.296, 539.961, 401.056), (0.3, 0.3, 0.3), 18.4716)
if 'Cog6_GFPN' not in marker_sets:
    s = new_marker_set('Cog6_GFPN')
    marker_sets['Cog6_GFPN'] = s
s = marker_sets['Cog6_GFPN']
mark = s.place_marker((511.432, 560.558, 418.793), (0.21, 0.49, 0.72), 18.4716)
if 'Cog6_0' not in marker_sets:
    s = new_marker_set('Cog6_0')
    marker_sets['Cog6_0'] = s
s = marker_sets['Cog6_0']
mark = s.place_marker((511.432, 560.592, 418.737), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_1' not in marker_sets:
    s = new_marker_set('Cog6_1')
    marker_sets['Cog6_1'] = s
s = marker_sets['Cog6_1']
mark = s.place_marker((495.083, 577.476, 434.513), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_2' not in marker_sets:
    s = new_marker_set('Cog6_2')
    marker_sets['Cog6_2'] = s
s = marker_sets['Cog6_2']
mark = s.place_marker((483.455, 561.702, 454.94), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_3' not in marker_sets:
    s = new_marker_set('Cog6_3')
    marker_sets['Cog6_3'] = s
s = marker_sets['Cog6_3']
mark = s.place_marker((474.817, 535.619, 461.408), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_4' not in marker_sets:
    s = new_marker_set('Cog6_4')
    marker_sets['Cog6_4'] = s
s = marker_sets['Cog6_4']
mark = s.place_marker((478.674, 508.747, 453.395), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_5' not in marker_sets:
    s = new_marker_set('Cog6_5')
    marker_sets['Cog6_5'] = s
s = marker_sets['Cog6_5']
mark = s.place_marker((480.033, 481.029, 447.855), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_6' not in marker_sets:
    s = new_marker_set('Cog6_6')
    marker_sets['Cog6_6'] = s
s = marker_sets['Cog6_6']
mark = s.place_marker((482.143, 452.716, 442.624), (0.21, 0.49, 0.72), 17.1475)
if 'Cog6_GFPC' not in marker_sets:
    s = new_marker_set('Cog6_GFPC')
    marker_sets['Cog6_GFPC'] = s
s = marker_sets['Cog6_GFPC']
mark = s.place_marker((519.426, 501.731, 500.317), (0.21, 0.49, 0.72), 18.4716)
if 'Cog6_Anch' not in marker_sets:
    s = new_marker_set('Cog6_Anch')
    marker_sets['Cog6_Anch'] = s
s = marker_sets['Cog6_Anch']
mark = s.place_marker((446.248, 399.583, 381.235), (0.21, 0.49, 0.72), 18.4716)
if 'Cog7_GFPN' not in marker_sets:
    s = new_marker_set('Cog7_GFPN')
    marker_sets['Cog7_GFPN'] = s
s = marker_sets['Cog7_GFPN']
mark = s.place_marker((539.353, 543.386, 500.727), (0.7, 0.7, 0.7), 18.4716)
if 'Cog7_0' not in marker_sets:
    s = new_marker_set('Cog7_0')
    marker_sets['Cog7_0'] = s
s = marker_sets['Cog7_0']
mark = s.place_marker((544.605, 549.19, 475.527), (0.7, 0.7, 0.7), 17.1475)
if 'Cog7_1' not in marker_sets:
    s = new_marker_set('Cog7_1')
    marker_sets['Cog7_1'] = s
s = marker_sets['Cog7_1']
mark = s.place_marker((558.005, 563.544, 421.894), (0.7, 0.7, 0.7), 17.1475)
if 'Cog7_2' not in marker_sets:
    s = new_marker_set('Cog7_2')
    marker_sets['Cog7_2'] = s
s = marker_sets['Cog7_2']
mark = s.place_marker((571.436, 577.947, 368.209), (0.7, 0.7, 0.7), 17.1475)
if 'Cog7_GFPC' not in marker_sets:
    s = new_marker_set('Cog7_GFPC')
    marker_sets['Cog7_GFPC'] = s
s = marker_sets['Cog7_GFPC']
mark = s.place_marker((508.62, 629.225, 376.098), (0.7, 0.7, 0.7), 18.4716)
if 'Cog7_Anch' not in marker_sets:
    s = new_marker_set('Cog7_Anch')
    marker_sets['Cog7_Anch'] = s
s = marker_sets['Cog7_Anch']
mark = s.place_marker((636.519, 560.093, 288.137), (0.7, 0.7, 0.7), 18.4716)
if 'Cog8_0' not in marker_sets:
    s = new_marker_set('Cog8_0')
    marker_sets['Cog8_0'] = s
s = marker_sets['Cog8_0']
mark = s.place_marker((472.676, 619.045, 435.739), (1, 0.5, 0), 17.1475)
if 'Cog8_1' not in marker_sets:
    s = new_marker_set('Cog8_1')
    marker_sets['Cog8_1'] = s
s = marker_sets['Cog8_1']
mark = s.place_marker((499.53, 611.251, 440.339), (1, 0.5, 0), 17.1475)
if 'Cog8_2' not in marker_sets:
    s = new_marker_set('Cog8_2')
    marker_sets['Cog8_2'] = s
s = marker_sets['Cog8_2']
mark = s.place_marker((527.38, 605.614, 443.715), (1, 0.5, 0), 17.1475)
if 'Cog8_3' not in marker_sets:
    s = new_marker_set('Cog8_3')
    marker_sets['Cog8_3'] = s
s = marker_sets['Cog8_3']
mark = s.place_marker((555.974, 601.89, 445.831), (1, 0.5, 0), 17.1475)
if 'Cog8_4' not in marker_sets:
    s = new_marker_set('Cog8_4')
    marker_sets['Cog8_4'] = s
s = marker_sets['Cog8_4']
mark = s.place_marker((584.887, 597.686, 447.026), (1, 0.5, 0), 17.1475)
if 'Cog8_5' not in marker_sets:
    s = new_marker_set('Cog8_5')
    marker_sets['Cog8_5'] = s
s = marker_sets['Cog8_5']
mark = s.place_marker((613.591, 591.044, 448.529), (1, 0.5, 0), 17.1475)
if 'Cog8_GFPC' not in marker_sets:
    s = new_marker_set('Cog8_GFPC')
    marker_sets['Cog8_GFPC'] = s
s = marker_sets['Cog8_GFPC']
mark = s.place_marker((539.329, 564.984, 455.17), (1, 0.6, 0.1), 18.4716)
if 'Cog8_Anch' not in marker_sets:
    s = new_marker_set('Cog8_Anch')
    marker_sets['Cog8_Anch'] = s
s = marker_sets['Cog8_Anch']
mark = s.place_marker((694.073, 613.407, 442.164), (1, 0.6, 0.1), 18.4716)
for k in surf_sets.keys():
    chimera.openModels.add([surf_sets[k]])

import _surface
import chimera
try:
  import chimera.runCommand
except:
  pass
from VolumePath import markerset as ms
try:
  from VolumePath import Marker_Set, Link
  new_marker_set=Marker_Set
except:
  from VolumePath import volume_path_dialog
  d= volume_path_dialog(True)
  new_marker_set= d.new_marker_set
marker_sets={}
surf_sets={}
if "Cog2_GFPN" not in marker_sets:
  s=new_marker_set('Cog2_GFPN')
  marker_sets["Cog2_GFPN"]=s
s= marker_sets["Cog2_GFPN"]
mark=s.place_marker((455.091, 548.131, 441.132), (0.89, 0.1, 0.1), 18.4716)
if "Cog2_0" not in marker_sets:
  s=new_marker_set('Cog2_0')
  marker_sets["Cog2_0"]=s
s= marker_sets["Cog2_0"]
mark=s.place_marker((523.214, 547.7, 441.398), (0.89, 0.1, 0.1), 17.1475)
if "Cog2_1" not in marker_sets:
  s=new_marker_set('Cog2_1')
  marker_sets["Cog2_1"]=s
s= marker_sets["Cog2_1"]
mark=s.place_marker((604.168, 545.527, 428.693), (0.89, 0.1, 0.1), 17.1475)
if "Cog2_GFPC" not in marker_sets:
  s=new_marker_set('Cog2_GFPC')
  marker_sets["Cog2_GFPC"]=s
s= marker_sets["Cog2_GFPC"]
mark=s.place_marker((518.447, 575.68, 322.142), (0.89, 0.1, 0.1), 18.4716)
if "Cog2_Anch" not in marker_sets:
  s=new_marker_set('Cog2_Anch')
  marker_sets["Cog2_Anch"]=s
s= marker_sets["Cog2_Anch"]
mark=s.place_marker((797.322, 526.929, 442.213), (0.89, 0.1, 0.1), 18.4716)
if "Cog3_GFPN" not in marker_sets:
  s=new_marker_set('Cog3_GFPN')
  marker_sets["Cog3_GFPN"]=s
s= marker_sets["Cog3_GFPN"]
mark=s.place_marker((500.094, 537.392, 437.867), (1, 1, 0), 18.4716)
if "Cog3_0" not in marker_sets:
  s=new_marker_set('Cog3_0')
  marker_sets["Cog3_0"]=s
s= marker_sets["Cog3_0"]
mark=s.place_marker((499.049, 536.799, 437.736), (1, 1, 0.2), 17.1475)
if "Cog3_1" not in marker_sets:
  s=new_marker_set('Cog3_1')
  marker_sets["Cog3_1"]=s
s= marker_sets["Cog3_1"]
mark=s.place_marker((507.795, 510.364, 433.323), (1, 1, 0.2), 17.1475)
if "Cog3_2" not in marker_sets:
  s=new_marker_set('Cog3_2')
  marker_sets["Cog3_2"]=s
s= marker_sets["Cog3_2"]
mark=s.place_marker((506.351, 483.306, 425.224), (1, 1, 0.2), 17.1475)
if "Cog3_3" not in marker_sets:
  s=new_marker_set('Cog3_3')
  marker_sets["Cog3_3"]=s
s= marker_sets["Cog3_3"]
mark=s.place_marker((512.173, 459.896, 410.9), (1, 1, 0.2), 17.1475)
if "Cog3_4" not in marker_sets:
  s=new_marker_set('Cog3_4')
  marker_sets["Cog3_4"]=s
s= marker_sets["Cog3_4"]
mark=s.place_marker((499.613, 441.476, 393.556), (1, 1, 0.2), 17.1475)
if "Cog3_5" not in marker_sets:
  s=new_marker_set('Cog3_5')
  marker_sets["Cog3_5"]=s
s= marker_sets["Cog3_5"]
mark=s.place_marker((479.094, 450.653, 410.209), (1, 1, 0.2), 17.1475)
if "Cog3_GFPC" not in marker_sets:
  s=new_marker_set('Cog3_GFPC')
  marker_sets["Cog3_GFPC"]=s
s= marker_sets["Cog3_GFPC"]
mark=s.place_marker((479.04, 548.96, 453.22), (1, 1, 0.4), 18.4716)
if "Cog3_Anch" not in marker_sets:
  s=new_marker_set('Cog3_Anch')
  marker_sets["Cog3_Anch"]=s
s= marker_sets["Cog3_Anch"]
mark=s.place_marker((480.576, 351.176, 373.656), (1, 1, 0.4), 18.4716)
if "Cog4_GFPN" not in marker_sets:
  s=new_marker_set('Cog4_GFPN')
  marker_sets["Cog4_GFPN"]=s
s= marker_sets["Cog4_GFPN"]
mark=s.place_marker((673.497, 390.666, 419.207), (0, 0, 0.8), 18.4716)
if "Cog4_0" not in marker_sets:
  s=new_marker_set('Cog4_0')
  marker_sets["Cog4_0"]=s
s= marker_sets["Cog4_0"]
mark=s.place_marker((673.497, 390.666, 419.207), (0, 0, 0.8), 17.1475)
if "Cog4_1" not in marker_sets:
  s=new_marker_set('Cog4_1')
  marker_sets["Cog4_1"]=s
s= marker_sets["Cog4_1"]
mark=s.place_marker((658.83, 408.297, 437.275), (0, 0, 0.8), 17.1475)
if "Cog4_2" not in marker_sets:
  s=new_marker_set('Cog4_2')
  marker_sets["Cog4_2"]=s
s= marker_sets["Cog4_2"]
mark=s.place_marker((644.149, 425.559, 455.293), (0, 0, 0.8), 17.1475)
if "Cog4_3" not in marker_sets:
  s=new_marker_set('Cog4_3')
  marker_sets["Cog4_3"]=s
s= marker_sets["Cog4_3"]
mark=s.place_marker((626.546, 444.478, 467.926), (0, 0, 0.8), 17.1475)
if "Cog4_4" not in marker_sets:
  s=new_marker_set('Cog4_4')
  marker_sets["Cog4_4"]=s
s= marker_sets["Cog4_4"]
mark=s.place_marker((605.469, 463.335, 473.505), (0, 0, 0.8), 17.1475)
if "Cog4_5" not in marker_sets:
  s=new_marker_set('Cog4_5')
  marker_sets["Cog4_5"]=s
s= marker_sets["Cog4_5"]
mark=s.place_marker((583.358, 481.4, 470.075), (0, 0, 0.8), 17.1475)
if "Cog4_6" not in marker_sets:
  s=new_marker_set('Cog4_6')
  marker_sets["Cog4_6"]=s
s= marker_sets["Cog4_6"]
mark=s.place_marker((561.884, 498.364, 459.575), (0, 0, 0.8), 17.1475)
if "Cog4_GFPC" not in marker_sets:
  s=new_marker_set('Cog4_GFPC')
  marker_sets["Cog4_GFPC"]=s
s= marker_sets["Cog4_GFPC"]
mark=s.place_marker((615.326, 292.629, 312.28), (0, 0, 0.8), 18.4716)
if "Cog4_Anch" not in marker_sets:
  s=new_marker_set('Cog4_Anch')
  marker_sets["Cog4_Anch"]=s
s= marker_sets["Cog4_Anch"]
mark=s.place_marker((486.93, 713.637, 585.084), (0, 0, 0.8), 18.4716)
if "Cog5_GFPN" not in marker_sets:
  s=new_marker_set('Cog5_GFPN')
  marker_sets["Cog5_GFPN"]=s
s= marker_sets["Cog5_GFPN"]
mark=s.place_marker((588.597, 521.567, 466.245), (0.3, 0.3, 0.3), 18.4716)
if "Cog5_0" not in marker_sets:
  s=new_marker_set('Cog5_0')
  marker_sets["Cog5_0"]=s
s= marker_sets["Cog5_0"]
mark=s.place_marker((588.597, 521.567, 466.245), (0.3, 0.3, 0.3), 17.1475)
if "Cog5_1" not in marker_sets:
  s=new_marker_set('Cog5_1')
  marker_sets["Cog5_1"]=s
s= marker_sets["Cog5_1"]
mark=s.place_marker((581.12, 523.025, 438.528), (0.3, 0.3, 0.3), 17.1475)
if "Cog5_2" not in marker_sets:
  s=new_marker_set('Cog5_2')
  marker_sets["Cog5_2"]=s
s= marker_sets["Cog5_2"]
mark=s.place_marker((577.383, 534.584, 411.93), (0.3, 0.3, 0.3), 17.1475)
if "Cog5_3" not in marker_sets:
  s=new_marker_set('Cog5_3')
  marker_sets["Cog5_3"]=s
s= marker_sets["Cog5_3"]
mark=s.place_marker((590.151, 557.636, 400.096), (0.3, 0.3, 0.3), 17.1475)
if "Cog5_GFPC" not in marker_sets:
  s=new_marker_set('Cog5_GFPC')
  marker_sets["Cog5_GFPC"]=s
s= marker_sets["Cog5_GFPC"]
mark=s.place_marker((468.427, 583.357, 396.507), (0.3, 0.3, 0.3), 18.4716)
if "Cog5_Anch" not in marker_sets:
  s=new_marker_set('Cog5_Anch')
  marker_sets["Cog5_Anch"]=s
s= marker_sets["Cog5_Anch"]
mark=s.place_marker((714.296, 539.961, 401.056), (0.3, 0.3, 0.3), 18.4716)
if "Cog6_GFPN" not in marker_sets:
  s=new_marker_set('Cog6_GFPN')
  marker_sets["Cog6_GFPN"]=s
s= marker_sets["Cog6_GFPN"]
mark=s.place_marker((511.432, 560.558, 418.793), (0.21, 0.49, 0.72), 18.4716)
if "Cog6_0" not in marker_sets:
  s=new_marker_set('Cog6_0')
  marker_sets["Cog6_0"]=s
s= marker_sets["Cog6_0"]
mark=s.place_marker((511.432, 560.592, 418.737), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_1" not in marker_sets:
  s=new_marker_set('Cog6_1')
  marker_sets["Cog6_1"]=s
s= marker_sets["Cog6_1"]
mark=s.place_marker((495.083, 577.476, 434.513), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_2" not in marker_sets:
  s=new_marker_set('Cog6_2')
  marker_sets["Cog6_2"]=s
s= marker_sets["Cog6_2"]
mark=s.place_marker((483.455, 561.702, 454.94), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_3" not in marker_sets:
  s=new_marker_set('Cog6_3')
  marker_sets["Cog6_3"]=s
s= marker_sets["Cog6_3"]
mark=s.place_marker((474.817, 535.619, 461.408), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_4" not in marker_sets:
  s=new_marker_set('Cog6_4')
  marker_sets["Cog6_4"]=s
s= marker_sets["Cog6_4"]
mark=s.place_marker((478.674, 508.747, 453.395), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_5" not in marker_sets:
  s=new_marker_set('Cog6_5')
  marker_sets["Cog6_5"]=s
s= marker_sets["Cog6_5"]
mark=s.place_marker((480.033, 481.029, 447.855), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_6" not in marker_sets:
  s=new_marker_set('Cog6_6')
  marker_sets["Cog6_6"]=s
s= marker_sets["Cog6_6"]
mark=s.place_marker((482.143, 452.716, 442.624), (0.21, 0.49, 0.72), 17.1475)
if "Cog6_GFPC" not in marker_sets:
  s=new_marker_set('Cog6_GFPC')
  marker_sets["Cog6_GFPC"]=s
s= marker_sets["Cog6_GFPC"]
mark=s.place_marker((519.426, 501.731, 500.317), (0.21, 0.49, 0.72), 18.4716)
if "Cog6_Anch" not in marker_sets:
  s=new_marker_set('Cog6_Anch')
  marker_sets["Cog6_Anch"]=s
s= marker_sets["Cog6_Anch"]
mark=s.place_marker((446.248, 399.583, 381.235), (0.21, 0.49, 0.72), 18.4716)
if "Cog7_GFPN" not in marker_sets:
  s=new_marker_set('Cog7_GFPN')
  marker_sets["Cog7_GFPN"]=s
s= marker_sets["Cog7_GFPN"]
mark=s.place_marker((539.353, 543.386, 500.727), (0.7, 0.7, 0.7), 18.4716)
if "Cog7_0" not in marker_sets:
  s=new_marker_set('Cog7_0')
  marker_sets["Cog7_0"]=s
s= marker_sets["Cog7_0"]
mark=s.place_marker((544.605, 549.19, 475.527), (0.7, 0.7, 0.7), 17.1475)
if "Cog7_1" not in marker_sets:
  s=new_marker_set('Cog7_1')
  marker_sets["Cog7_1"]=s
s= marker_sets["Cog7_1"]
mark=s.place_marker((558.005, 563.544, 421.894), (0.7, 0.7, 0.7), 17.1475)
if "Cog7_2" not in marker_sets:
  s=new_marker_set('Cog7_2')
  marker_sets["Cog7_2"]=s
s= marker_sets["Cog7_2"]
mark=s.place_marker((571.436, 577.947, 368.209), (0.7, 0.7, 0.7), 17.1475)
if "Cog7_GFPC" not in marker_sets:
  s=new_marker_set('Cog7_GFPC')
  marker_sets["Cog7_GFPC"]=s
s= marker_sets["Cog7_GFPC"]
mark=s.place_marker((508.62, 629.225, 376.098), (0.7, 0.7, 0.7), 18.4716)
if "Cog7_Anch" not in marker_sets:
  s=new_marker_set('Cog7_Anch')
  marker_sets["Cog7_Anch"]=s
s= marker_sets["Cog7_Anch"]
mark=s.place_marker((636.519, 560.093, 288.137), (0.7, 0.7, 0.7), 18.4716)
if "Cog8_0" not in marker_sets:
  s=new_marker_set('Cog8_0')
  marker_sets["Cog8_0"]=s
s= marker_sets["Cog8_0"]
mark=s.place_marker((472.676, 619.045, 435.739), (1, 0.5, 0), 17.1475)
if "Cog8_1" not in marker_sets:
  s=new_marker_set('Cog8_1')
  marker_sets["Cog8_1"]=s
s= marker_sets["Cog8_1"]
mark=s.place_marker((499.53, 611.251, 440.339), (1, 0.5, 0), 17.1475)
if "Cog8_2" not in marker_sets:
  s=new_marker_set('Cog8_2')
  marker_sets["Cog8_2"]=s
s= marker_sets["Cog8_2"]
mark=s.place_marker((527.38, 605.614, 443.715), (1, 0.5, 0), 17.1475)
if "Cog8_3" not in marker_sets:
  s=new_marker_set('Cog8_3')
  marker_sets["Cog8_3"]=s
s= marker_sets["Cog8_3"]
mark=s.place_marker((555.974, 601.89, 445.831), (1, 0.5, 0), 17.1475)
if "Cog8_4" not in marker_sets:
  s=new_marker_set('Cog8_4')
  marker_sets["Cog8_4"]=s
s= marker_sets["Cog8_4"]
mark=s.place_marker((584.887, 597.686, 447.026), (1, 0.5, 0), 17.1475)
if "Cog8_5" not in marker_sets:
  s=new_marker_set('Cog8_5')
  marker_sets["Cog8_5"]=s
s= marker_sets["Cog8_5"]
mark=s.place_marker((613.591, 591.044, 448.529), (1, 0.5, 0), 17.1475)
if "Cog8_GFPC" not in marker_sets:
  s=new_marker_set('Cog8_GFPC')
  marker_sets["Cog8_GFPC"]=s
s= marker_sets["Cog8_GFPC"]
mark=s.place_marker((539.329, 564.984, 455.17), (1, 0.6, 0.1), 18.4716)
if "Cog8_Anch" not in marker_sets:
  s=new_marker_set('Cog8_Anch')
  marker_sets["Cog8_Anch"]=s
s= marker_sets["Cog8_Anch"]
mark=s.place_marker((694.073, 613.407, 442.164), (1, 0.6, 0.1), 18.4716)
for k in surf_sets.keys():
  chimera.openModels.add([surf_sets[k]])
