


from typing import TYPE_CHECKING

from ...utils import (
    OptionalDependencyNotAvailable,
    _LazyModule,
    is_flax_available,
    is_tf_available,
    is_tokenizers_available,
    is_torch_available,
)


_snake_case					:		Any      =    {
    "configuration_roformer": ["ROFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP", "RoFormerConfig", "RoFormerOnnxConfig"],
    "tokenization_roformer": ["RoFormerTokenizer"],
}

try:
			if not is_tokenizers_available():
						raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
			pass
else:
			_snake_case					:		Optional[int]      =    ["RoFormerTokenizerFast"]

try:
			if not is_torch_available():
						raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
			pass
else:
			_snake_case					:		int      =    [
			    "ROFORMER_PRETRAINED_MODEL_ARCHIVE_LIST",
			    "RoFormerForCausalLM",
			    "RoFormerForMaskedLM",
			    "RoFormerForMultipleChoice",
			    "RoFormerForQuestionAnswering",
			    "RoFormerForSequenceClassification",
			    "RoFormerForTokenClassification",
			    "RoFormerLayer",
			    "RoFormerModel",
			    "RoFormerPreTrainedModel",
			    "load_tf_weights_in_roformer",
			]


try:
			if not is_tf_available():
						raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
			pass
else:
			_snake_case					:		Union[str, Any]      =    [
			    "TF_ROFORMER_PRETRAINED_MODEL_ARCHIVE_LIST",
			    "TFRoFormerForCausalLM",
			    "TFRoFormerForMaskedLM",
			    "TFRoFormerForMultipleChoice",
			    "TFRoFormerForQuestionAnswering",
			    "TFRoFormerForSequenceClassification",
			    "TFRoFormerForTokenClassification",
			    "TFRoFormerLayer",
			    "TFRoFormerModel",
			    "TFRoFormerPreTrainedModel",
			]


try:
			if not is_flax_available():
						raise OptionalDependencyNotAvailable()
except OptionalDependencyNotAvailable:
			pass
else:
			_snake_case					:		List[Any]      =    [
			    "FLAX_ROFORMER_PRETRAINED_MODEL_ARCHIVE_LIST",
			    "FlaxRoFormerForMaskedLM",
			    "FlaxRoFormerForMultipleChoice",
			    "FlaxRoFormerForQuestionAnswering",
			    "FlaxRoFormerForSequenceClassification",
			    "FlaxRoFormerForTokenClassification",
			    "FlaxRoFormerModel",
			    "FlaxRoFormerPreTrainedModel",
			]


if TYPE_CHECKING:
			from .configuration_roformer import ROFORMER_PRETRAINED_CONFIG_ARCHIVE_MAP, RoFormerConfig, RoFormerOnnxConfig
			from .tokenization_roformer import RoFormerTokenizer

			try:
						if not is_tokenizers_available():
									raise OptionalDependencyNotAvailable()
			except OptionalDependencyNotAvailable:
						pass
			else:
						from .tokenization_roformer_fast import RoFormerTokenizerFast

			try:
						if not is_torch_available():
									raise OptionalDependencyNotAvailable()
			except OptionalDependencyNotAvailable:
						pass
			else:
						from .modeling_roformer import (
						    ROFORMER_PRETRAINED_MODEL_ARCHIVE_LIST,
						    RoFormerForCausalLM,
						    RoFormerForMaskedLM,
						    RoFormerForMultipleChoice,
						    RoFormerForQuestionAnswering,
						    RoFormerForSequenceClassification,
						    RoFormerForTokenClassification,
						    RoFormerLayer,
						    RoFormerModel,
						    RoFormerPreTrainedModel,
						    load_tf_weights_in_roformer,
						)

			try:
						if not is_tf_available():
									raise OptionalDependencyNotAvailable()
			except OptionalDependencyNotAvailable:
						pass
			else:
						from .modeling_tf_roformer import (
						    TF_ROFORMER_PRETRAINED_MODEL_ARCHIVE_LIST,
						    TFRoFormerForCausalLM,
						    TFRoFormerForMaskedLM,
						    TFRoFormerForMultipleChoice,
						    TFRoFormerForQuestionAnswering,
						    TFRoFormerForSequenceClassification,
						    TFRoFormerForTokenClassification,
						    TFRoFormerLayer,
						    TFRoFormerModel,
						    TFRoFormerPreTrainedModel,
						)

			try:
						if not is_flax_available():
									raise OptionalDependencyNotAvailable()
			except OptionalDependencyNotAvailable:
						pass
			else:
						from .modeling_flax_roformer import (
						    FLAX_ROFORMER_PRETRAINED_MODEL_ARCHIVE_LIST,
						    FlaxRoFormerForMaskedLM,
						    FlaxRoFormerForMultipleChoice,
						    FlaxRoFormerForQuestionAnswering,
						    FlaxRoFormerForSequenceClassification,
						    FlaxRoFormerForTokenClassification,
						    FlaxRoFormerModel,
						    FlaxRoFormerPreTrainedModel,
						)


else:
			import sys

			_snake_case					:		Tuple      =    _LazyModule(__name__, globals()["__file__"], _import_structure, module_spec=__spec__)





from typing import Dict

import numpy as np
import torch

from . import residue_constants as rc
from .tensor_utils import tensor_tree_map, tree_map







def     lowerCAmelCase_					( __lowerCamelCase     ):
							__snake_case		:      Any										=       []
							__snake_case		:      Optional[Any]										=       []
							__snake_case		:      List[Any]										=       []

							for rt in rc.restypes:
														__snake_case		:      Any										=       rc.restype_name_to_atomaa_names[rc.restype_atoa[rt]]
														restype_atomaa_to_atomaa_list.append([(rc.atom_order[name] if name else 0) for name in atom_names]     )
														__snake_case		:      Tuple										=       {name: i for i, name in enumerate(__lowerCamelCase     )}
														restype_atomaa_to_atomaa_list.append(
														    [(atom_name_to_idxaa[name] if name in atom_name_to_idxaa else 0) for name in rc.atom_types]     )

														restype_atomaa_mask_list.append([(1.0 if name else 0.0) for name in atom_names]     )

							# Add dummy mapping for restype 'UNK'
							restype_atomaa_to_atomaa_list.append([0] * 1_4     )
							restype_atomaa_to_atomaa_list.append([0] * 3_7     )
							restype_atomaa_mask_list.append([0.0] * 1_4     )

							__snake_case		:      int										=       torch.tensor(
							    __lowerCamelCase							,     dtype=torch.intaa							,     device=protein["aatype"].device							,     )
							__snake_case		:      List[str]										=       torch.tensor(
							    __lowerCamelCase							,     dtype=torch.intaa							,     device=protein["aatype"].device							,     )
							__snake_case		:      Optional[Any]										=       torch.tensor(
							    __lowerCamelCase							,     dtype=torch.floataa							,     device=protein["aatype"].device							,     )
							__snake_case		:      Optional[int]										=       protein["aatype"].to(torch.long     )

							# create the mapping for (residx, atom14) --> atom37, i.e. an array
							# with shape (num_res, 14) containing the atom37 indices for this protein
							__snake_case		:      Optional[Any]										=       restype_atomaa_to_atomaa[protein_aatype]
							__snake_case		:      Tuple										=       restype_atomaa_mask[protein_aatype]

							__snake_case		:      Optional[Any]										=       residx_atomaa_mask
							__snake_case		:      Union[str, Any]										=       residx_atomaa_to_atomaa.long()

							# create the gather indices for mapping back
							__snake_case		:      Dict										=       restype_atomaa_to_atomaa[protein_aatype]
							__snake_case		:      Dict										=       residx_atomaa_to_atomaa.long()

							# create the corresponding mask
							__snake_case		:      List[str]										=       torch.zeros([2_1, 3_7]							,     dtype=torch.floataa							,     device=protein["aatype"].device     )
							for restype, restype_letter in enumerate(rc.restypes     ):
														__snake_case		:      List[str]										=       rc.restype_atoa[restype_letter]
														__snake_case		:      List[Any]										=       rc.residue_atoms[restype_name]
														for atom_name in atom_names:
																					__snake_case		:      Union[str, Any]										=       rc.atom_order[atom_name]
																					__snake_case		:      str										=       1

							__snake_case		:      List[str]										=       restype_atomaa_mask[protein_aatype]
							__snake_case		:      List[str]										=       residx_atomaa_mask

							return protein







def     lowerCAmelCase_					( __lowerCamelCase     ):
							__snake_case		:      str										=       tree_map(lambda __lowerCamelCase     : torch.tensor(__lowerCamelCase							,     device=batch["aatype"].device     )							,     __lowerCamelCase							,     np.ndarray     )
							__snake_case		:      str										=       tensor_tree_map(lambda __lowerCamelCase     : np.array(__lowerCamelCase     )							,     make_atomaa_masks(__lowerCamelCase     )     )
							return out

